RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 LOXP28300 417 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-207ENST00000487645 SSTR2P30874 369 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 HTR1FP30939 366 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 HSPA13P48723 471 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 IDH3GP51553 393 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-207ENST00000487645 RPS7P62081 194 aaKnown RBP11.57□□□□□ -0.56
COL4A6-207ENST00000487645 BSPH1Q075Z2 132 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 GGTLC2Q14390 218 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 RAB39AQ14964 217 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 PABPC1L2AQ5JQF8 200 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 FBXW10Q5XX13 1052 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 SHFQ7M4L6 423 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 ENTHD1Q8IYW4 607 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 SETD9Q8NE22 299 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 OR1J2Q8NGS2 313 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 ZMYND19Q96E35 227 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-207ENST00000487645 PIK3IP1Q96FE7 263 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 ZNF582Q96NG8 517 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-207ENST00000487645 TMEM204Q9BSN7 226 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 WNT5BQ9H1J7 359 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 WDR76Q9H967 626 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 NOX3Q9HBY0 568 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 RASSF1Q9NS23 344 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 CLN6Q9NWW5 311 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 ASH2LQ9UBL3 628 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 POLR1DQ9Y2S0 133 aa11.57□□□□□ -0.56
COL4A6-207ENST00000487645 TACC2O95359 2948 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 SGCEO43556 437 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 CRYAAP02489 173 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 CECR9P0C854 216 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 AQP4P55087 323 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 CDH11P55287 796 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 CACNA1DQ01668 2161 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 NAAAQ02083 359 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 SLC18B1Q6NT16 456 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 LYPD4Q6UWN0 246 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 RHOUQ7L0Q8 258 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 SLC16A9Q7RTY1 509 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 BCDIN3DQ7Z5W3 292 aaKnown RBP11.56□□□□□ -0.56
COL4A6-207ENST00000487645 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-207ENST00000487645 ERI1Q8IV48 349 aaKnown RBP11.56□□□□□ -0.56
COL4A6-207ENST00000487645 ZNF584Q8IVC4 421 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 CPEB3Q8NE35 698 aaKnown RBP11.56□□□□□ -0.56
COL4A6-207ENST00000487645 KCNS3Q9BQ31 491 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 YIPF3Q9GZM5 350 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 ATPIF1Q9UII2 106 aa11.56□□□□□ -0.56
COL4A6-207ENST00000487645 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL4A6-207ENST00000487645 RER1O15258 196 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 ENTPD6O75354 484 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 CELA3BP08861 270 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 SPARCP09486 303 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 ZNF35P13682 527 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 STOMP27105 288 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 APLNRP35414 380 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 ISL1P61371 349 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 IL5RAQ01344 420 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 POU4F2Q12837 409 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 ECH1Q13011 328 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 MAD2L1BPQ15013 274 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-207ENST00000487645 CCDC92Q53HC0 331 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-207ENST00000487645 ELFN2Q5R3F8 820 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 OTPQ5XKR4 325 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 ZNF774Q6NX45 483 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 CORO6Q6QEF8 472 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 IZUMO2Q6UXV1 221 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 B3GLCTQ6Y288 498 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 USP51Q70EK9 711 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 VASH1Q7L8A9 365 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-207ENST00000487645 DPY19L4Q7Z388 723 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 C8orf59Q8N0T1 100 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-207ENST00000487645 ZNF454Q8N9F8 522 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 SLC30A7Q8NEW0 376 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 AKR7LQ8NHP1 331 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 IPCEF1Q8WWN9 437 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-207ENST00000487645 MS4A3Q96HJ5 214 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 POM121L2Q96KW2 1035 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 MNTQ99583 582 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 HDHD2Q9H0R4 259 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 PLEK2Q9NYT0 353 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 DNAJC27Q9NZQ0 273 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 GDF2Q9UK05 429 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-207ENST00000487645 RNF115Q9Y4L5 304 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 PLCE1Q9P212 2302 aa11.55□□□□□ -0.56
COL4A6-207ENST00000487645 ROS1P08922 2347 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 OR6C6A6NF89 314 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 ABCD4O14678 606 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 SYNGR3O43761 229 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 DOK2O60496 412 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 CLIC3O95833 236 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 GNAO1P09471 354 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 APEX1P27695 318 aaKnown RBP11.54□□□□□ -0.56
COL4A6-207ENST00000487645 MTNR1AP48039 350 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 GDI2P50395 445 aaKnown RBP11.54□□□□□ -0.56
COL4A6-207ENST00000487645 NUDT6P53370 316 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 TLE4Q04727 773 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 RAB35Q15286 201 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 SNCBQ16143 134 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 TBC1D28Q2M2D7 210 aa11.54□□□□□ -0.56
COL4A6-207ENST00000487645 C6orf52Q5T4I8 152 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms