RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 BBS1Q8NFJ9 593 aa16.93■□□□□ 0.3
SEC22A-208ENST00000487572 OR1J2Q8NGS2 313 aa16.93■□□□□ 0.3
SEC22A-208ENST00000487572 SLC29A1Q99808 456 aa16.93■□□□□ 0.3
SEC22A-208ENST00000487572 WACQ9BTA9 647 aa16.93■□□□□ 0.3
SEC22A-208ENST00000487572 GRIP2Q9C0E4 1043 aa16.93■□□□□ 0.3
SEC22A-208ENST00000487572 PLEK2Q9NYT0 353 aa16.93■□□□□ 0.3
SEC22A-208ENST00000487572 POLQO75417 2590 aa16.93■□□□□ 0.3
SEC22A-208ENST00000487572 CADP27708 2225 aa16.93■□□□□ 0.3
SEC22A-208ENST00000487572 C5orf49A4QMS7 147 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 SOD3P08294 240 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 FAM157BP0CG42 384 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 CD53P19397 219 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 RPS27P42677 84 aaKnown RBP16.92■□□□□ 0.3
SEC22A-208ENST00000487572 HTR5AP47898 357 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 RPS7P62081 194 aaKnown RBP16.92■□□□□ 0.3
SEC22A-208ENST00000487572 C12orf73Q69YU5 71 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 TMEM154Q6P9G4 183 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 VASH1Q7L8A9 365 aaPredicted RBP16.92■□□□□ 0.3
SEC22A-208ENST00000487572 OR2AJ1Q8NGZ0 328 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 WDR76Q9H967 626 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 CA10Q9NS85 328 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 FAIMQ9NVQ4 179 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 SPEF1Q9Y4P9 236 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 COMMD3-BMI1R4GMX3 469 aa16.92■□□□□ 0.3
SEC22A-208ENST00000487572 NOTCH2Q04721 2471 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 LOC100509620A0A075B734 347 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 GLCEO94923 617 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 SPARCP09486 303 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 DANCRP0C864 163 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 NR4A1P22736 598 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 THBS4P35443 961 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 GGT2P36268 569 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 LRRC36Q1X8D7 754 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 CCDC92Q53HC0 331 aaPredicted RBP16.91■□□□□ 0.3
SEC22A-208ENST00000487572 LINC01590Q5TEZ4 76 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 SLC18B1Q6NT16 456 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 ZNF771Q7L3S4 317 aaPredicted RBP16.91■□□□□ 0.3
SEC22A-208ENST00000487572 FBXL14Q8N1E6 418 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 TCEANCQ8N8B7 351 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 NUP37Q8NFH4 326 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 GJC3Q8NFK1 279 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 ZMYND19Q96E35 227 aaPredicted RBP16.91■□□□□ 0.3
SEC22A-208ENST00000487572 POM121L2Q96KW2 1035 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 IL4I1Q96RQ9 567 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 GDF2Q9UK05 429 aaPredicted RBP16.91■□□□□ 0.3
SEC22A-208ENST00000487572 ITGB1BP2Q9UKP3 347 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 LRBAP50851 2863 aa16.91■□□□□ 0.3
SEC22A-208ENST00000487572 RAI1Q7Z5J4 1906 aaPredicted RBP16.91■□□□□ 0.3
SEC22A-208ENST00000487572 TLX2O43763 284 aaPredicted RBP16.9■□□□□ 0.3
SEC22A-208ENST00000487572 GPRIN2O60269 458 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 PSKH1P11801 424 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 GSTT1P30711 240 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 APOBEC3AP31941 199 aaPredicted RBP16.9■□□□□ 0.3
SEC22A-208ENST00000487572 TTKP33981 857 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 ENTPD1P49961 510 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 BLVRAP53004 296 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 NKX6-1P78426 367 aaPredicted RBP16.9■□□□□ 0.3
SEC22A-208ENST00000487572 APOFQ13790 326 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 RAB35Q15286 201 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 LPCAT4Q643R3 524 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 ZNF544Q6NX49 715 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 CFAP77Q6ZQR2 320 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 BCDIN3DQ7Z5W3 292 aaKnown RBP16.9■□□□□ 0.3
SEC22A-208ENST00000487572 ERI1Q8IV48 349 aaKnown RBP16.9■□□□□ 0.3
SEC22A-208ENST00000487572 MUC15Q8N387 334 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 GALNT4Q8N4A0 578 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 OR1F12Q8NHA8 337 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 TMEM171Q8WVE6 324 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 NINJ1Q92982 152 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 PIGTQ969N2 578 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 TOR3AQ9H497 397 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 CYB5R1Q9UHQ9 305 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 KCNG2Q9UJ96 466 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 NDRG4Q9ULP0 352 aaKnown RBP16.9■□□□□ 0.3
SEC22A-208ENST00000487572 ROS1P08922 2347 aa16.9■□□□□ 0.3
SEC22A-208ENST00000487572 AKAP6Q13023 2319 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 ZNF593O00488 134 aaPredicted RBP16.89■□□□□ 0.29
SEC22A-208ENST00000487572 PRODHO43272 600 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 SYNGR3O43761 229 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 SNAP29O95721 258 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 OR4A8P0C604 315 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 PEX2P28328 305 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 HIST1H3AP68431 136 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 HIST2H3PS2Q5TEC6 136 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 AGAP6Q5VW22 663 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 HIST2H3AQ71DI3 136 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 OR6N2Q8NGY6 317 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 TMEM163Q8TC26 289 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 SLC7A6Q92536 515 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 INTS14Q96SY0 518 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 MBOAT4Q96T53 435 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 PITX2Q99697 317 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 HEATR1Q9H583 2144 aaKnown RBP16.89■□□□□ 0.29
SEC22A-208ENST00000487572 EIF3KQ9UBQ5 218 aaKnown RBP16.89■□□□□ 0.29
SEC22A-208ENST00000487572 PDZD2O15018 2839 aa16.89■□□□□ 0.29
SEC22A-208ENST00000487572 OR6C6A6NF89 314 aa16.88■□□□□ 0.29
SEC22A-208ENST00000487572 H0YHG0 523 aa16.88■□□□□ 0.29
SEC22A-208ENST00000487572 TMCC2O75069 709 aa16.88■□□□□ 0.29
SEC22A-208ENST00000487572 SLC2A5P22732 501 aa16.88■□□□□ 0.29
SEC22A-208ENST00000487572 SERPINF1P36955 418 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms