RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 HIST3H2AQ7L7L0 130 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 VASH1Q7L8A9 365 aaPredicted RBP12.63□□□□□ -0.39
NME1-208ENST00000487481 NANOGNBQ7Z5D8 188 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 NFKBIDQ8NI38 313 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 ZNF420Q8TAQ5 688 aaPredicted RBP12.63□□□□□ -0.39
NME1-208ENST00000487481 ASB10Q8WXI3 467 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 HIST1H2ACQ93077 130 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 TBX15Q96SF7 602 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 DPAGT1Q9H3H5 408 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 TBCCD1Q9NVR7 557 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 NECAP2Q9NVZ3 263 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 STX18Q9P2W9 335 aaKnown RBP12.63□□□□□ -0.39
NME1-208ENST00000487481 LGALS13Q9UHV8 139 aa12.63□□□□□ -0.39
NME1-208ENST00000487481 COL7A1Q02388 2944 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 IGHV1-69DA0A0B4J2H0 117 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 GMNCA6NCL1 334 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 ZNF879B4DU55 563 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 CLIC1O00299 241 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 SDHDO14521 159 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 TYROBPO43914 113 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 FMO6PO60774 539 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 SLC22A3O75751 556 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 TOX4O94842 621 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 IGHV1-69P01742 117 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 MMP9P14780 707 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 SLC1A6P48664 564 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 ZNF181Q2M3W8 571 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 GCNT6Q5T4J0 391 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 REEP3Q6NUK4 255 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 Q6ZTK2 550 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 C1orf87Q8N0U7 546 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 EIF1ADQ8N9N8 165 aaKnown RBP12.62□□□□□ -0.39
NME1-208ENST00000487481 MEGF10Q96KG7 1140 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 WFDC6Q9BQY6 131 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 RASSF4Q9H2L5 321 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 POFUT1Q9H488 388 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
NME1-208ENST00000487481 NDRG4Q9ULP0 352 aaKnown RBP12.62□□□□□ -0.39
NME1-208ENST00000487481 TIMM10BQ9Y5J6 103 aa12.62□□□□□ -0.39
NME1-208ENST00000487481 ZNF816-ZNF321PA0A0X1KG74 233 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 WDR91A4D1P6 747 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 LRRC30A6NM36 301 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 GPR37O15354 613 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 LIPFP07098 398 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 CST2P09228 141 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 UMPSP11172 480 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 NR2C1P13056 603 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 IDO1P14902 403 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 PCBD1P61457 104 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 CDK6Q00534 326 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 HERPUD1Q15011 391 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 TTC33Q6PID6 262 aaPredicted RBP12.61□□□□□ -0.39
NME1-208ENST00000487481 DCDC5Q6ZRR9 648 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 GALNT4Q8N4A0 578 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 ATG16L2Q8NAA4 619 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 NSMAFQ92636 917 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 NMD3Q96D46 503 aaKnown RBP12.61□□□□□ -0.39
NME1-208ENST00000487481 CMBLQ96DG6 245 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 MCHR1Q99705 422 aa12.61□□□□□ -0.39
NME1-208ENST00000487481 IGKV1D-43A0A0B4J1Z2 117 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 A0A0U1RQK1 487 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 BLOC1S5-TXNDC5H3BN57 136 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 KPNA4O00629 521 aaPredicted RBP12.6□□□□□ -0.39
NME1-208ENST00000487481 BIRC5O15392 142 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 F13BP05160 661 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 LAP3P28838 519 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 EPHA3P29320 983 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 SRP9P49458 86 aaKnown RBP12.6□□□□□ -0.39
NME1-208ENST00000487481 NPY4RP50391 375 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 UGT2B15P54855 530 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 GUCY1A3Q02108 690 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 FMODQ06828 376 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 RPL18Q07020 188 aaKnown RBP12.6□□□□□ -0.39
NME1-208ENST00000487481 CD47Q08722 323 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 RUNDC3AQ59EK9 446 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 CD276Q5ZPR3 534 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 ZNF841Q6ZN19 808 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 SCCPDHQ8NBX0 429 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 HAVCR1Q96D42 359 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 COG8Q96MW5 612 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 WDFY2Q96P53 400 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 PAIP1Q9H074 479 aaKnown RBP12.6□□□□□ -0.39
NME1-208ENST00000487481 PNPOQ9NVS9 261 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 ZIM2Q9NZV7 527 aa12.6□□□□□ -0.39
NME1-208ENST00000487481 BTBD17A6NE02 478 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 XPNPEP2O43895 674 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 SERPINB7O75635 380 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 COX5BP10606 129 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 HOXB9P17482 250 aaPredicted RBP12.59□□□□□ -0.39
NME1-208ENST00000487481 TGFBR2P37173 567 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 ARMC4Q5T2S8 1044 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 METTL11BQ5VVY1 283 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 LYPD2Q6UXB3 125 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 ARMC8Q8IUR7 673 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 GOLGA6L1Q8N7Z2 621 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 OR10AD1Q8NGE0 317 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 SGCDQ92629 289 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 GTF2H4Q92759 462 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 TECTBQ96PL2 329 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms