RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 GALK2Q01415 458 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 RBBP4Q09028 425 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 FADDQ13158 208 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 LARS2Q15031 903 aaKnown RBP9.73□□□□□ -0.85
TRIM56-204ENST00000487252 ZBED5Q49AG3 693 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 RBM48Q5RL73 367 aaKnown RBP9.73□□□□□ -0.85
TRIM56-204ENST00000487252 DCST2Q5T1A1 773 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 PDZK1Q5T2W1 519 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 OR2T5Q6IEZ7 315 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 CCDC80Q76M96 950 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 THAP5Q7Z6K1 395 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 LDLRAD3Q86YD5 345 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 CLEC4FQ8N1N0 589 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 KLHL36Q8N4N3 616 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 SPICQ8N5J4 248 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 NATD1Q8N6N6 113 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 ZNF614Q8N883 585 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 OR4A15Q8NGL6 344 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 OR2T29Q8NH02 315 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 SNX33Q8WV41 574 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 HDAC2Q92769 488 aaKnown RBP9.73□□□□□ -0.85
TRIM56-204ENST00000487252 PPCDCQ96CD2 204 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 RAD21L1Q9H4I0 556 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 SMURF2Q9HAU4 748 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 VCX3AQ9NNX9 186 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 GPATCH2Q9NW75 528 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 FBLN5Q9UBX5 448 aa9.73□□□□□ -0.85
TRIM56-204ENST00000487252 H3BSA7 217 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 GNGT2O14610 69 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 AKR7A3O95154 331 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 CLIC3O95833 236 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 HLA-HP01893 362 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 HMGN2P05204 90 aaKnown RBP9.72□□□□□ -0.85
TRIM56-204ENST00000487252 FABP3P05413 133 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 NUDT7P0C024 238 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 RYKP34925 604 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 MMP16P51512 607 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 KRTAP10-11P60412 298 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 HBA1P69905 142 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 TOP3AQ13472 1001 aaPredicted RBP9.72□□□□□ -0.85
TRIM56-204ENST00000487252 ZNF141Q15928 474 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 GSG1Q2KHT4 349 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 ZIK1Q3SY52 487 aaPredicted RBP9.72□□□□□ -0.85
TRIM56-204ENST00000487252 RGS7BPQ6MZT1 257 aaPredicted RBP9.72□□□□□ -0.85
TRIM56-204ENST00000487252 ZNF774Q6NX45 483 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 NIPAL3Q6P499 406 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 ZNF773Q6PK81 442 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 BTNL3Q6UXE8 466 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 LSRQ86X29 649 aaPredicted RBP9.72□□□□□ -0.85
TRIM56-204ENST00000487252 LRRC28Q86X40 367 aaPredicted RBP9.72□□□□□ -0.85
TRIM56-204ENST00000487252 OFCC1Q8IZS5 231 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 C8orf59Q8N0T1 100 aaPredicted RBP9.72□□□□□ -0.85
TRIM56-204ENST00000487252 C11orf65Q8NCR3 313 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 OR4S1Q8NGB4 309 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 CDC26Q8NHZ8 85 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 PMM1Q92871 262 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 NEURL3Q96EH8 262 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 HSH2DQ96JZ2 352 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 C7orf34Q96L11 122 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 TMEM38AQ9H6F2 299 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 TMEM165Q9HC07 324 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 GPR35Q9HC97 309 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 ZNF224Q9NZL3 707 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 SH3BP4Q9P0V3 963 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 KCNE3Q9Y6H6 103 aa9.72□□□□□ -0.85
TRIM56-204ENST00000487252 CENPVL1A0A0U1RR11 272 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 KIR2DS1A0A191URI9 304 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ZC3H12DA2A288 527 aaKnown RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 LIPT2A6NK58 231 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF99A8MXY4 864 aaPredicted RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 TPD52L2O43399 206 aaKnown RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 SLC43A1O75387 559 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF682O95780 498 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 C6orf47O95873 294 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ADH4P08319 380 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 SBK2P0C263 348 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 EFNA1P20827 205 aaPredicted RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 UQCRC2P22695 453 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 RAD23AP54725 363 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 SELENOVP59797 346 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 GABARAPL2P60520 117 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 KCNJ10P78508 379 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 CDK5R2Q13319 367 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 TSTQ16762 297 aaKnown RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 LRRC23Q53EV4 343 aaPredicted RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ESCO2Q56NI9 601 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 GCNT6Q5T4J0 391 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 GPR157Q5UAW9 335 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF691Q5VV52 312 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 KDM4DQ6B0I6 523 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 LAIR2Q6ISS4 152 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 PGBD2Q6P3X8 592 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 FAHD1Q6P587 224 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF627Q7L945 461 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 TSEN54Q7Z6J9 526 aaKnown RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 GPAT4Q86UL3 456 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 CYP4Z1Q86W10 505 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF584Q8IVC4 421 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 SLC30A8Q8IWU4 369 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 HS3ST5Q8IZT8 346 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms