RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 MAPK3P27361 379 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-211ENST00000486901 HTR2CP28335 458 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 NPY4RP50391 375 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF550Q7Z398 422 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF584Q8IVC4 421 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 NAXDQ8IW45 347 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 NAXEQ8NCW5 288 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 OR4D6Q8NGJ1 314 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 MARCH1Q8TCQ1 289 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 NPRL2Q8WTW4 380 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 MRPL48Q96GC5 212 aaKnown RBP11.15□□□□□ -0.62
HSPG2-211ENST00000486901 C4orf45Q96LM5 186 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 STACQ99469 402 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 SFXN1Q9H9B4 322 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 FANCFQ9NPI8 374 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 GPN3Q9UHW5 284 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-211ENST00000486901 CXorf51AA0A1B0GTR3 108 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 MSGN1A6NI15 193 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 B4DGG1 531 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF208O43345 1280 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 SIGLEC6O43699 453 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 RPA2P15927 270 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 IL11P20809 199 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 COL9A1P20849 921 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 S1PR1P21453 382 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 CASRP41180 1078 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 ARFIP1P53367 373 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 S100A10P60903 97 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 PMPCAQ10713 525 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 IGSF11Q5DX21 431 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 ZNF684Q5T5D7 378 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 COX15Q7KZN9 410 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 TRAPPC6BQ86SZ2 158 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 RLN3Q8WXF3 142 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 DGAT2Q96PD7 388 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 POTEKPQ9BYX7 375 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 NMNAT2Q9BZQ4 307 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 MMP25Q9NPA2 562 aa11.15□□□□□ -0.62
HSPG2-211ENST00000486901 DNAJC13O75165 2243 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 LOC100289279A0A1B0GTE1 492 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 TIMP1P01033 207 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 CTLA4P16410 223 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 NME2P22392 152 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 SERPINF1P36955 418 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 SNRPEP62304 92 aaKnown RBP11.15□□□□□ -0.63
HSPG2-211ENST00000486901 IKZF1Q13422 519 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 RNASE10Q5GAN6 216 aaKnown RBP11.15□□□□□ -0.63
HSPG2-211ENST00000486901 FJX1Q86VR8 437 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 TMEM151BQ8IW70 566 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 OR13C3Q8NGS6 347 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 FLVCR1-AS1Q8TAF5 88 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 ISOC2Q96AB3 205 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 ZC3H10Q96K80 434 aaKnown RBP11.15□□□□□ -0.63
HSPG2-211ENST00000486901 NUDT22Q9BRQ3 303 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 PTGES2Q9H7Z7 377 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 BARX1Q9HBU1 254 aaPredicted RBP11.15□□□□□ -0.63
HSPG2-211ENST00000486901 KLF15Q9UIH9 416 aa11.15□□□□□ -0.63
HSPG2-211ENST00000486901 PURGQ9UJV8 347 aaKnown RBP11.15□□□□□ -0.63
HSPG2-211ENST00000486901 A0A1W2PP11 408 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 TMEM218A2RU14 115 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 SDCBPO00560 298 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 SRPX2O60687 465 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 TPPPO94811 219 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 SMIM10L1P0DMW3 83 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 SDHAP31040 664 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 CD96P40200 585 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 TMEM225Q6GV28 225 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 SMIM10Q96HG1 83 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 OR10A5Q9H207 317 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 GAREM1Q9H706 876 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 GLS2Q9UI32 602 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 MKL2Q9ULH7 1088 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 ZNF749O43361 778 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 RENP00797 406 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 OR1D4P47884 311 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 TAS2R19P59542 299 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 SCRN3Q0VDG4 424 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 PDZK1IP1Q13113 114 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 AIMP2Q13155 320 aaKnown RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 GGTLC2Q14390 218 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 PAPD4Q6PIY7 484 aaKnown RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 ZSCAN1Q8NBB4 408 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 RRNAD1Q96FB5 475 aaKnown RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 VSTM2LQ96N03 204 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 EMC6Q9BV81 110 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 BANF2Q9H503 90 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 ACKR4Q9NPB9 350 aa11.14□□□□□ -0.63
HSPG2-211ENST00000486901 COA3Q9Y2R0 106 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 TMEM184BQ9Y519 407 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-211ENST00000486901 TUBAL3A6NHL2 446 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 SHISA8B8ZZ34 492 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 NDUFA2O43678 99 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 UBBP0CG47 229 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 UBCP0CG48 685 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 RCC1P18754 421 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms