RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 OR7E24Q6IFN5 339 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 SLC16A14Q7RTX9 510 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 SLC16A9Q7RTY1 509 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 DPY19L4Q7Z388 723 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF786Q8N393 782 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 STEAP2Q8NFT2 490 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 OR52I1Q8NGK6 324 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 OR6N2Q8NGY6 317 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 SGCDQ92629 289 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 CNN2Q99439 309 aaKnown RBP11.15□□□□□ -0.62
HDAC6-229ENST00000486665 CDADC1Q9BWV3 514 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 ACTR6Q9GZN1 396 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 NOX3Q9HBY0 568 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 NPDC1Q9NQX5 325 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-229ENST00000486665 B3GNT2Q9NY97 397 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 ASH2LQ9UBL3 628 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 CYB5R1Q9UHQ9 305 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 PSORS1C1Q9UIG5 152 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 KCNG2Q9UJ96 466 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 COPS3Q9UNS2 423 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 KLHDC2Q9Y2U9 406 aa11.15□□□□□ -0.62
HDAC6-229ENST00000486665 OR5H1A6NKK0 313 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 C12orf71A8MTZ7 269 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 PTGES3LE9PB15 166 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 CD79AP11912 226 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 HOXB1P14653 301 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF32P17041 273 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 ATP6V1E1P36543 226 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 CAPZA2P47755 286 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 CSNK2BP67870 215 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 HIST1H3AP68431 136 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 MVKQ03426 396 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 HIST2H3PS2Q5TEC6 136 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 SLC18B1Q6NT16 456 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 HIST2H3AQ71DI3 136 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 CDC20BQ86Y33 519 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 SLC35F2Q8IXU6 374 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 RFLNBQ8N5W9 214 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 OR52N5Q8NH56 324 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 AMELYQ99218 206 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 TBX5Q99593 518 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 C1QTNF6Q9BXI9 259 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 YIPF3Q9GZM5 350 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 FGF20Q9NP95 211 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-229ENST00000486665 FKBP14Q9NWM8 211 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 PAK1IP1Q9NWT1 392 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-229ENST00000486665 GDF2Q9UK05 429 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-229ENST00000486665 MYRFQ9Y2G1 1151 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 SLC25A15Q9Y619 301 aa11.14□□□□□ -0.63
HDAC6-229ENST00000486665 MAP1AP78559 2803 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-229ENST00000486665 ARPC4-TTLL3A0A0A6YYG9 625 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 PRR32B1ATL7 298 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 RER1O15258 196 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 WNT11O96014 354 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 THBDP07204 575 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 CCDC159P0C7I6 412 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 ALOX5APP20292 161 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 CRHBPP24387 322 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 SSTR2P30874 369 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 UBE2NP61088 152 aaKnown RBP11.13□□□□□ -0.63
HDAC6-229ENST00000486665 RAB1AP62820 205 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 PSG4Q00888 419 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 TLE4Q04727 773 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 RAB40BQ12829 278 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 POU4F2Q12837 409 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 TAB1Q15750 504 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 KLHL22Q53GT1 634 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 CCDC92Q53HC0 331 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-229ENST00000486665 RBM48Q5RL73 367 aaKnown RBP11.13□□□□□ -0.63
HDAC6-229ENST00000486665 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 TMEM154Q6P9G4 183 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 CFAP77Q6ZQR2 320 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 DCXRQ7Z4W1 244 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 SYT9Q86SS6 491 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 CDH24Q86UP0 819 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 MDP1Q86V88 176 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 C17orf78Q8N4C9 275 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF540Q8NDQ6 660 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 OR10H4Q8NGA5 316 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 AKR7LQ8NHP1 331 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 OTOSQ8NHW6 89 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 LINC01560Q8TB33 94 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 MAP6Q96JE9 813 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF75AQ96N20 296 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 WFIKKN1Q96NZ8 548 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 WNT5BQ9H1J7 359 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 OR10A4Q9H209 315 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 KCNN2Q9H2S1 579 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 DUSP21Q9H596 190 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 RNF121Q9H920 327 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 SCN3BQ9NY72 215 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 ERVK-18Q9QC07 812 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 LRCH1Q9Y2L9 728 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 POLR1DQ9Y2S0 133 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 TIMM10BQ9Y5J6 103 aa11.13□□□□□ -0.63
HDAC6-229ENST00000486665 VPS13CQ709C8 3753 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 A0A1W2PQL4 384 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-229ENST00000486665 EFCAB10A6NFE3 127 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 MAGEB4O15481 346 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-229ENST00000486665 TMCC2O75069 709 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms