RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 EIF3KQ9UBQ5 218 aaKnown RBP6.71□□□□□ -1.34
XRN1-212ENST00000486211 CAB39Q9Y376 341 aaPredicted RBP6.71□□□□□ -1.34
XRN1-212ENST00000486211 FRAS1Q86XX4 4008 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 TRAV36DV7A0A075B6V5 113 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 A0A1W2PRX2 142 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 TMEM114B3SHH9 223 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 G3V2L1 256 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 NPFFO15130 113 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 CHST1O43916 411 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 LYPLA1O75608 230 aaPredicted RBP6.7□□□□□ -1.34
XRN1-212ENST00000486211 BGLAPP02818 100 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 CHRM2P08172 466 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 NQO1P15559 274 aaKnown RBP6.7□□□□□ -1.34
XRN1-212ENST00000486211 TCP1P17987 556 aaKnown RBP6.7□□□□□ -1.34
XRN1-212ENST00000486211 PRPS1L1P21108 318 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 ERFP50548 548 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 ANXA11P50995 505 aaKnown RBP6.7□□□□□ -1.34
XRN1-212ENST00000486211 CD83Q01151 205 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 PRB3Q04118 309 aaPredicted RBP6.7□□□□□ -1.34
XRN1-212ENST00000486211 PUDPQ08623 228 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 OR4F3Q6IEY1 312 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 UNQ6126/PRO20091Q6UXV3 157 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 KRT77Q7Z794 578 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 PXKQ7Z7A4 578 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 SERPINA11Q86U17 422 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 IGFN1Q86VF2 1251 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 LRRC18Q8N456 261 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 C19orf18Q8NEA5 215 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 OR6X1Q8NH79 312 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 SLC38A4Q969I6 547 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 TUBGCP3Q96CW5 907 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 MAGEB18Q96M61 343 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 CHID1Q9BWS9 393 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 MKS1Q9NXB0 559 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 DNAJC15Q9Y5T4 150 aa6.7□□□□□ -1.34
XRN1-212ENST00000486211 IGHV3-64DA0A0J9YX35 117 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 A0A1B0GVI7 797 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 EXOC1LA0A1B0GW35 172 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 H0YHG0 523 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 RNASET2O00584 256 aaKnown RBP6.69□□□□□ -1.34
XRN1-212ENST00000486211 PLPP3O14495 311 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 AZIN1O14977 448 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 SERPINI2O75830 405 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 PGA4P0DJD7 388 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 PGA3P0DJD8 388 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 PF4V1P10720 104 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 ZNF26P17031 533 aaPredicted RBP6.69□□□□□ -1.34
XRN1-212ENST00000486211 ZNF32P17041 273 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 VAMP1P23763 118 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 SAA4P35542 130 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 GDI2P50395 445 aaKnown RBP6.69□□□□□ -1.34
XRN1-212ENST00000486211 HOXA4Q00056 320 aaPredicted RBP6.69□□□□□ -1.34
XRN1-212ENST00000486211 HOXC5Q00444 222 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 LY6EQ16553 131 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 KCNMB1Q16558 191 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 MLANAQ16655 118 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 CDONQ4KMG0 1287 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 RNF220Q5VTB9 566 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 KANK2Q63ZY3 851 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 C5orf46Q6UWT4 87 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 MOGAT3Q86VF5 341 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 LCA5Q86VQ0 697 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 PEX5LQ8IYB4 626 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 LINC00482Q8N8I6 264 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 BEND2Q8NDZ0 799 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 OR4A15Q8NGL6 344 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 OR6S1Q8NH40 331 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 AKR7LQ8NHP1 331 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 MAELQ96JY0 434 aaKnown RBP6.69□□□□□ -1.34
XRN1-212ENST00000486211 TEX37Q96LM6 180 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 MOGAT1Q96PD6 335 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 RCHY1Q96PM5 261 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 DDOQ99489 341 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 C1orf50Q9BV19 199 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 NPFFR1Q9GZQ6 430 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 C12orf10Q9HB07 376 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 MRPL39Q9NYK5 338 aaKnown RBP6.69□□□□□ -1.34
XRN1-212ENST00000486211 NINJ2Q9NZG7 142 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 ZNF180Q9UJW8 692 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 EMCNQ9ULC0 261 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 TMCC3Q9ULS5 477 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 FIS1Q9Y3D6 152 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 KPTNQ9Y664 436 aa6.69□□□□□ -1.34
XRN1-212ENST00000486211 A0A1W2PRD5 423 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 A0A1W2PRF3 423 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 A0A1W2PRM7 423 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 LRRN3E7EW58 273 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 OR10H3O60404 316 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 PF4P02776 101 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 QDPRP09417 244 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 CCDC159P0C7I6 412 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 FAHP16930 419 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 DLX1P56177 255 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 NAA20P61599 178 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 PSG4Q00888 419 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 CAV1Q03135 178 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 KLRD1Q13241 179 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 HIST3H3Q16695 136 aa6.68□□□□□ -1.34
XRN1-212ENST00000486211 PGS1Q32NB8 556 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms