RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 MBD3L5A6NJ08 208 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 SYT5O00445 386 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 CTDSPLO15194 276 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 EMC8O43402 210 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 RNF13O43567 381 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 NCR1O76036 304 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 UBL3O95164 117 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 TGM6O95932 706 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 IGKV1D-16P01601 117 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 H2AFB2P0C5Z0 115 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 OR12D1P0DN82 309 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 CTSSP25774 331 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 HTR1FP30939 366 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 NUP62P37198 522 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 FRKP42685 505 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 LHX2P50458 406 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 ASCL1P50553 236 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 DSCR4P56555 118 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 SSTP61278 116 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MADCAM1Q13477 382 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 SLC36A2Q495M3 483 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 RPS26P11Q5JNZ5 115 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 NHLRC3Q5JS37 347 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 AADACL4Q5VUY2 407 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 POMZP3Q6PJE2 187 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 ZNF322Q6U7Q0 402 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 PLXDC2Q6UX71 529 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 TMEM200AQ86VY9 491 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 PIAS4Q8N2W9 510 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 MS4A15Q8N5U1 240 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 FADS6Q8N9I5 356 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 CDRT4Q8N9R6 151 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MBD3L2Q8NHZ7 208 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 BBS10Q8TAM1 723 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 OSTF1Q92882 214 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 C16orf58Q96GQ5 468 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 KLHL15Q96M94 604 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MS4A4EQ96PG1 132 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 ZNF649Q9BS31 505 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 RTN4RQ9BZR6 473 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 ZNF436Q9C0F3 470 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 BCL2L10Q9HD36 194 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MAN2C1Q9NTJ4 1040 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MED12LQ86YW9 2145 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 TRAV6A0A075B6T7 132 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 MFSD2BA6NFX1 497 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 OR6C65A6NJZ3 312 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 HMGN4O00479 90 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 EEF1E1O43324 174 aaKnown RBP9.57□□□□□ -0.88
DDX56-212ENST00000485367 GSTZ1O43708 216 aaPredicted RBP9.57□□□□□ -0.88
DDX56-212ENST00000485367 LANCL1O43813 399 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 GMFGO60234 142 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 NKX2-2O95096 273 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 ACSM4P0C7M7 580 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 TMIGD3P0DMS9 266 aaPredicted RBP9.57□□□□□ -0.88
DDX56-212ENST00000485367 CXCL3P19876 107 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 OPRM1P35372 400 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 THBS2P35442 1172 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 ANXA11P50995 505 aaKnown RBP9.57□□□□□ -0.88
DDX56-212ENST00000485367 CLDN18P56856 261 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 B3GALT5-AS1P59052 145 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 RPS7P62081 194 aaKnown RBP9.57□□□□□ -0.88
DDX56-212ENST00000485367 PIN1Q13526 163 aaPredicted RBP9.57□□□□□ -0.88
DDX56-212ENST00000485367 MLC1Q15049 377 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 FAM69AQ5T7M9 428 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 PRAMEF8Q5VWM4 474 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 PRAMEF7Q5VXH5 474 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 RAET1LQ5VY80 246 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 MFSD12Q6NUT3 480 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 BHLHB9Q6PI77 547 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 SMARCD3Q6STE5 483 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 SEZ6L2Q6UXD5 910 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 C6orf120Q7Z4R8 191 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 OR4D11Q8NGI4 311 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 OR5M1Q8NGP8 315 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 SPRYD4Q8WW59 207 aaPredicted RBP9.57□□□□□ -0.88
DDX56-212ENST00000485367 RNASE6Q93091 150 aaKnown RBP9.57□□□□□ -0.88
DDX56-212ENST00000485367 SGTBQ96EQ0 304 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 CMTM3Q96MX0 182 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 YIPF4Q9BSR8 244 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 CACNG6Q9BXT2 260 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 TMPRSS13Q9BYE2 586 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 PTGES2Q9H7Z7 377 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 INPP5EQ9NRR6 644 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 NTMQ9P121 344 aa9.57□□□□□ -0.88
DDX56-212ENST00000485367 MPDZO75970 2070 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 TEP1Q99973 2627 aaKnown RBP9.56□□□□□ -0.88
DDX56-212ENST00000485367 EEF1E1-BLOC1S5C9J1V9 151 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 APOC1P02654 83 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 EIF4EP06730 217 aaKnown RBP9.56□□□□□ -0.88
DDX56-212ENST00000485367 TFPIP10646 304 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 CD8BP10966 210 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 ZNF708P17019 499 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 POU3F2P20265 443 aaPredicted RBP9.56□□□□□ -0.88
DDX56-212ENST00000485367 MAP3K8P41279 467 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 CENPAP49450 140 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 TAS2R43P59537 309 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 PRR5P85299 388 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 FOXF2Q12947 444 aa9.56□□□□□ -0.88
DDX56-212ENST00000485367 DUSP5Q16690 384 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms