RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 IL2RAP01589 272 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 HOXD4P09016 255 aaPredicted RBP12.74□□□□□ -0.37
LRIF1-202ENST00000485275 PSMB10P40306 273 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ACTA2P62736 377 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ACTG2P63267 376 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ROM1Q03395 351 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 MLLT11Q13015 90 aaPredicted RBP12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF813Q6ZN06 617 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 GPR141Q7Z602 305 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 RNF133Q8WVZ7 376 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 DMRTA2Q96SC8 542 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 NOX3Q9HBY0 568 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 PLSCR4Q9NRQ2 329 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ST6GALNAC2Q9UJ37 374 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 POLR1DQ9Y2S0 133 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 TMEM14AQ9Y6G1 99 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 CEPT1Q9Y6K0 416 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 H3BSA7 217 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 MT-ND5P03915 603 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 NPR2P20594 1047 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 COX5AP20674 150 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 MPGP29372 298 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 NANOS3P60323 173 aaKnown RBP12.74□□□□□ -0.37
LRIF1-202ENST00000485275 HIST1H3AP68431 136 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 RBPJQ06330 500 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 EGR3Q06889 387 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ACSM1Q08AH1 577 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 TSC22D1Q15714 1073 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 STK11Q15831 433 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 HIST2H3PS2Q5TEC6 136 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 LIPNQ5VXI9 398 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 LIPKQ5VXJ0 399 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 OR7E24Q6IFN5 339 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 SLC16A12Q6ZSM3 486 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 Q6ZT83 130 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 HIST2H3AQ71DI3 136 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 GABRG1Q8N1C3 465 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF610Q8N9Z0 462 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 SLAMF6Q96DU3 332 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 CDADC1Q9BWV3 514 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 IKZF2Q9UKS7 526 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 LRP12Q9Y561 859 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 SRSF10O75494 262 aaKnown RBP12.73□□□□□ -0.37
LRIF1-202ENST00000485275 CRHP06850 196 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 MMP7P09237 267 aaPredicted RBP12.73□□□□□ -0.37
LRIF1-202ENST00000485275 OPRL1P41146 370 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 CA7P43166 264 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 RGS6P49758 472 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 AQP6Q13520 282 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 HIKESHIQ53FT3 197 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 CCDC92Q53HC0 331 aaPredicted RBP12.73□□□□□ -0.37
LRIF1-202ENST00000485275 TMPRSS11AQ6ZMR5 421 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 LIX1LQ8IVB5 337 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 PHC2Q8IXK0 858 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF679Q8IYX0 411 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 OR1K1Q8NGR3 316 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 ZFP3Q96NJ6 502 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 DCLRE1CQ96SD1 692 aaKnown RBP12.73□□□□□ -0.37
LRIF1-202ENST00000485275 FUNDC2Q9BWH2 189 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 C1orf198Q9H425 327 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 ELOVL3Q9HB03 270 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 BABAM2Q9NXR7 383 aa12.73□□□□□ -0.37
LRIF1-202ENST00000485275 TRGV8A0A0C4DH27 118 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 METTL15A6NJ78 407 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 PHYHO14832 338 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 LYZL6O75951 148 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 RPP14O95059 124 aaKnown RBP12.72□□□□□ -0.37
LRIF1-202ENST00000485275 PNPP00491 289 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 CST2P09228 141 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 CPEP16870 476 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF32P17041 273 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 NR4A1P22736 598 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 TUBA1BP68363 451 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 MFGE8Q08431 387 aaPredicted RBP12.72□□□□□ -0.37
LRIF1-202ENST00000485275 NRN1LQ496H8 165 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 GPR107Q5VW38 600 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF474Q6S9Z5 364 aaPredicted RBP12.72□□□□□ -0.37
LRIF1-202ENST00000485275 TUBA1AQ71U36 451 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 RPS4Y2Q8TD47 263 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 ASB17Q8WXJ9 295 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 RPL3LQ92901 407 aaKnown RBP12.72□□□□□ -0.37
LRIF1-202ENST00000485275 TRMT61AQ96FX7 289 aaKnown RBP12.72□□□□□ -0.37
LRIF1-202ENST00000485275 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 SFXN3Q9BWM7 321 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 PROCRQ9UNN8 238 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 OSGIN2Q9Y236 505 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 MEMO1Q9Y316 297 aa12.72□□□□□ -0.37
LRIF1-202ENST00000485275 SF3B6Q9Y3B4 125 aaKnown RBP12.72□□□□□ -0.37
LRIF1-202ENST00000485275 SULT1C4O75897 302 aa12.71□□□□□ -0.37
LRIF1-202ENST00000485275 HLA-HP01893 362 aa12.71□□□□□ -0.37
LRIF1-202ENST00000485275 KRT8P05787 483 aa12.71□□□□□ -0.37
LRIF1-202ENST00000485275 CD8BP10966 210 aa12.71□□□□□ -0.37
LRIF1-202ENST00000485275 CD36P16671 472 aa12.71□□□□□ -0.37
LRIF1-202ENST00000485275 CTSSP25774 331 aa12.71□□□□□ -0.37
LRIF1-202ENST00000485275 TPBGQ13641 420 aa12.71□□□□□ -0.37
LRIF1-202ENST00000485275 RSPO1Q2MKA7 263 aaPredicted RBP12.71□□□□□ -0.37
LRIF1-202ENST00000485275 SOWAHCQ53LP3 525 aaPredicted RBP12.71□□□□□ -0.37
LRIF1-202ENST00000485275 YIPF7Q8N8F6 280 aa12.71□□□□□ -0.37
LRIF1-202ENST00000485275 RELL2Q8NC24 303 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms