RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 MZT2AQ6P582 158 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 SPATC1Q76KD6 591 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 LAX1Q8IWV1 398 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 ZNF676Q8N7Q3 588 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 THRSPQ92748 146 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 NABP1Q96AH0 204 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 CEP19Q96LK0 163 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 SOSTQ9BQB4 213 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 G6PC2Q9NQR9 355 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 GDF2Q9UK05 429 aaPredicted RBP12.42□□□□□ -0.42
CLK3-204ENST00000483723 KLK13Q9UKR3 277 aa12.42□□□□□ -0.42
CLK3-204ENST00000483723 A0A1W2PPK0 400 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 DCDC2BA2VCK2 349 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 RGS5O15539 181 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 SLC43A1O75387 559 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 CPN1P15169 458 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 MAPK3P27361 379 aaPredicted RBP12.41□□□□□ -0.42
CLK3-204ENST00000483723 APEX1P27695 318 aaKnown RBP12.41□□□□□ -0.42
CLK3-204ENST00000483723 OR10A3P58181 314 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 PPP3R1P63098 170 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 HIST1H3AP68431 136 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 MFGE8Q08431 387 aaPredicted RBP12.41□□□□□ -0.42
CLK3-204ENST00000483723 DDI2Q5TDH0 399 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 HIST2H3PS2Q5TEC6 136 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 SFXN4Q6P4A7 337 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 CFAP77Q6ZQR2 320 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 HIST2H3AQ71DI3 136 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 AAED1Q7RTV5 226 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 OR2AJ1Q8NGZ0 328 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 GPR148Q8TDV2 347 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 SDHCQ99643 169 aaPredicted RBP12.41□□□□□ -0.42
CLK3-204ENST00000483723 NELFAQ9H3P2 528 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
CLK3-204ENST00000483723 FBXL3Q9UKT7 428 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 SLC22A13Q9Y226 551 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 V9GYH0 126 aa12.41□□□□□ -0.42
CLK3-204ENST00000483723 TRAV17A0A0B4J275 112 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 ACOD1A6NK06 481 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 NOTOA8MTQ0 251 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 TMEM127O75204 238 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 ISG15P05161 165 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 H2BFMP0C1H6 154 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 ZNF12P17014 697 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 MSR1P21757 451 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 CTSSP25774 331 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 MAGEB1P43366 347 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 MRPS34P82930 218 aaKnown RBP12.4□□□□□ -0.42
CLK3-204ENST00000483723 ENDOGQ14249 297 aaKnown RBP12.4□□□□□ -0.42
CLK3-204ENST00000483723 RIPPLY2Q5TAB7 128 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 RDH10Q8IZV5 341 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 OR10AC1Q8NH08 325 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 PPP1R14AQ96A00 147 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 ZNF775Q96BV0 537 aaPredicted RBP12.4□□□□□ -0.42
CLK3-204ENST00000483723 ULBP2Q9BZM5 246 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 NIPAL2Q9H841 368 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 OR52A1Q9UKL2 312 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 CACNA1CQ13936 2221 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 SPTBN4Q9H254 2564 aa12.4□□□□□ -0.42
CLK3-204ENST00000483723 TRGV5A0A0B4J1U4 118 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 UPK1BO75841 260 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 IGHG3P01860 377 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 OCM2P0CE71 109 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 EPXP11678 715 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 SRYQ05066 204 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 SLC25A35Q3KQZ1 300 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 IDNKQ5T6J7 187 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 FAM27BQ5VT28 67 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 IGFL3Q6UXB1 125 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.4□□□□□ -0.43
CLK3-204ENST00000483723 CPT1CQ8TCG5 803 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 ABHD3Q8WU67 409 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 WDYHV1Q96HA8 205 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 GFI1Q99684 422 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 ZNF416Q9BWM5 594 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 RBM24Q9BX46 236 aaKnown RBP12.4□□□□□ -0.43
CLK3-204ENST00000483723 DEFB127Q9H1M4 99 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 FAM206AQ9NX38 181 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 COMMD3Q9UBI1 195 aa12.4□□□□□ -0.43
CLK3-204ENST00000483723 NCOA6Q14686 2063 aaPredicted RBP12.39□□□□□ -0.43
CLK3-204ENST00000483723 A0A1B0GVG6 124 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 TMEM269A0A1B0GVZ9 245 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ZNF724A8MTY0 619 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ZNF878C9JN71 531 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 PDCD5O14737 125 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 SYNGR4O95473 234 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 GUCA1AP43080 201 aaPredicted RBP12.39□□□□□ -0.43
CLK3-204ENST00000483723 EVX1P49640 407 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ZNF84P51523 738 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 SGCAQ16586 387 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ZNF181Q2M3W8 571 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 METAP1DQ6UB28 335 aaPredicted RBP12.39□□□□□ -0.43
CLK3-204ENST00000483723 STAC2Q6ZMT1 411 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ZNF704Q6ZNC4 412 aaPredicted RBP12.39□□□□□ -0.43
CLK3-204ENST00000483723 SYT9Q86SS6 491 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ZNF837Q96EG3 531 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms