RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TMED9Q9BVK6 235 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 ZNF416Q9BWM5 594 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 SLCO5A1Q9H2Y9 848 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 NELFAQ9H3P2 528 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 PNRC2Q9NPJ4 139 aaKnown RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 TMEM38BQ9NVV0 291 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 PARPBPQ9NWS1 579 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 TXNL4BQ9NX01 149 aaKnown RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 GDF2Q9UK05 429 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-226ENST00000483656 IKZF2Q9UKS7 526 aa8.89□□□□□ -0.99
HDAC6-226ENST00000483656 SPENQ96T58 3664 aaKnown RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 RPL36A-HNRNPH2H7BZ11 118 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 TMCC2O75069 709 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 RPP14O95059 124 aaKnown RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 TACSTD2P09758 323 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 FCGR2AP12318 317 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 ZNF182P17025 639 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 PSMA1P25786 263 aaKnown RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 UGT2B10P36537 528 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 KIR3DL2P43630 455 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 GDI2P50395 445 aaKnown RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 ZNF84P51523 738 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 RPS11P62280 158 aaKnown RBP eCLIP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 ALKBH1Q13686 389 aaKnown RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 STK11Q15831 433 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 TIMM50Q3ZCQ8 353 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 PRR30Q53SZ7 412 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 FAM27BQ5VT28 67 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 NSUN5P2Q63ZY6 315 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 ZNF585AQ6P3V2 769 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 KCTD18Q6PI47 426 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 DEGS2Q6QHC5 323 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 P4HA3Q7Z4N8 544 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 KRT77Q7Z794 578 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 PRSS35Q8N3Z0 413 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 OR13C5Q8NGS8 318 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 ABHD4Q8TB40 342 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 DYNC2LI1Q8TCX1 351 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 RGP1Q92546 391 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 GHSRQ92847 366 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 SMIM19Q96E16 107 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 FBXO17Q96EF6 278 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 GMPPAQ96IJ6 420 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 MYCBPQ99417 103 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 CDADC1Q9BWV3 514 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 HDHD5Q9BXW7 423 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 C1orf198Q9H425 327 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 SIAEQ9HAT2 523 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 EXOSC4Q9NPD3 245 aaKnown RBP8.88□□□□□ -0.99
HDAC6-226ENST00000483656 B3GAT2Q9NPZ5 323 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 ASH2LQ9UBL3 628 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 PRSS50Q9UI38 385 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 FBXL3Q9UKT7 428 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 SSR3Q9UNL2 185 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 LRP12Q9Y561 859 aa8.88□□□□□ -0.99
HDAC6-226ENST00000483656 ITPR1Q14643 2758 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 TLN1Q9Y490 2541 aaKnown RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 TRBV2A0A0J9YWF9 115 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 TMEM8BA6NDV4 472 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 CD8B2A6NJW9 211 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 OR6C65A6NJZ3 312 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 OR4C45A6NMZ5 311 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 HSPB2A8KAH6 182 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 GABRPO00591 440 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 RER1O15258 196 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 ZNF254O75437 659 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 SC5DO75845 299 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 CD8BP10966 210 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 B4GALT1P15291 398 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 NPR2P20594 1047 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 FGF9P31371 208 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 KIR2DL2P43627 348 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 OR3A2P47893 321 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 ARF1P84077 181 aaKnown RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 MFGE8Q08431 387 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 MRPL28Q13084 256 aaKnown RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 HSPB2Q16082 182 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 CCDC92Q53HC0 331 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 C22orf42Q6IC83 251 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 OR7E24Q6IFN5 339 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 UNQ9370/PRO34162Q6UXP9 181 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 FAM220AQ7Z4H9 259 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 IL17RDQ8NFM7 739 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 OR2AJ1Q8NGZ0 328 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 OR2G2Q8NGZ5 317 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 FGFBP3Q8TAT2 258 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 FAM57AQ8TBR7 257 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 PPP1R14AQ96A00 147 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 APH1AQ96BI3 265 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 SNRNP40Q96DI7 357 aaKnown RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 C4orf45Q96LM5 186 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 FOXB1Q99853 325 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 SH3GL3Q99963 347 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 PDCD1LG2Q9BQ51 273 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 SLX1AQ9BQ83 275 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 MROQ9BYG7 248 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 DCSTAMPQ9H295 470 aa8.87□□□□□ -0.99
HDAC6-226ENST00000483656 PPIL3Q9H2H8 161 aaKnown RBP8.87□□□□□ -0.99
HDAC6-226ENST00000483656 C12orf49Q9H741 205 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms