RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 POM121L2Q96KW2 1035 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 RBM4BQ9BQ04 359 aaKnown RBP13.48□□□□□ -0.25
RPP40-206ENST00000483546 FN3KQ9H479 309 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 PLEK2Q9NYT0 353 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 ASH2LQ9UBL3 628 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 EIF3KQ9UBQ5 218 aaKnown RBP13.48□□□□□ -0.25
RPP40-206ENST00000483546 OAZ3Q9UMX2 235 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 CMAHPQ9Y471 501 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 PMF1-BGLAPU3KQ54 211 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 USF3Q68DE3 2245 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 H7C417 338 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 SURF4O15260 269 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 DOK2O60496 412 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 MPZL1O95297 269 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 HLA-DQA2P01906 255 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 OR4A8P0C604 315 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 ZNF823P16415 610 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 TUBG1P23258 451 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 FMO3P31513 532 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 THBS4P35443 961 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 HIST1H3AP68431 136 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 PPP2R2BQ00005 443 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 RAB35Q15286 201 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 SWI5Q1ZZU3 235 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 HIST2H3PS2Q5TEC6 136 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 ACSM5Q6NUN0 579 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 ZNF774Q6NX45 483 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 VHLLQ6RSH7 139 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 HIST2H3AQ71DI3 136 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 VASH1Q7L8A9 365 aaPredicted RBP13.47□□□□□ -0.25
RPP40-206ENST00000483546 IQCF1Q8N6M8 205 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 OR2AJ1Q8NGZ0 328 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 AKR7LQ8NHP1 331 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 STMN2Q93045 179 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 PLEKHA8Q96JA3 519 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 FOXN4Q96NZ1 517 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 DCLRE1CQ96SD1 692 aaKnown RBP13.47□□□□□ -0.25
RPP40-206ENST00000483546 CDADC1Q9BWV3 514 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 SEMA6AQ9H2E6 1030 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 BARX1Q9HBU1 254 aaPredicted RBP13.47□□□□□ -0.25
RPP40-206ENST00000483546 S100A14Q9HCY8 104 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 TUBG2Q9NRH3 451 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 CSMD1Q96PZ7 3565 aa13.47□□□□□ -0.25
RPP40-206ENST00000483546 OTOGQ6ZRI0 2925 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 C5orf49A4QMS7 147 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
RPP40-206ENST00000483546 H3BSA7 217 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 J3QW42 95 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 PRODHO43272 600 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 TFP02787 698 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
RPP40-206ENST00000483546 SPI1P17947 270 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 IGFBP5P24593 272 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 HTR5AP47898 357 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 UCP2P55851 309 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 ATP5J2P56134 94 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 ECH1Q13011 328 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 PTGES3Q15185 160 aaKnown RBP13.46□□□□□ -0.25
RPP40-206ENST00000483546 ICA1LQ8NDH6 482 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 OR9Q1Q8NGQ5 310 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 MRPL24Q96A35 216 aaKnown RBP13.46□□□□□ -0.25
RPP40-206ENST00000483546 COQ7Q99807 217 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 PKP2Q99959 881 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 CACNG6Q9BXT2 260 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 PLK3Q9H4B4 646 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 ELOVL3Q9HB03 270 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 CYB5R1Q9UHQ9 305 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 LHFPL6Q9Y693 200 aa13.46□□□□□ -0.25
RPP40-206ENST00000483546 LOC100509620A0A075B734 347 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 OR6C6A6NF89 314 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 SYNGR3O43761 229 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 CCL2P13500 99 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 CCNOP22674 350 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 PYCR1P32322 319 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 GGT2P36268 569 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 PPOXP50336 477 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 SELENOVP59797 346 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 ADAM8P78325 824 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 MST1LQ2TV78 715 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 TEX30Q5JUR7 227 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 ELFN2Q5R3F8 820 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 RGS7BPQ6MZT1 257 aaPredicted RBP13.45□□□□□ -0.26
RPP40-206ENST00000483546 SLC18B1Q6NT16 456 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 PAQR4Q8N4S7 273 aaPredicted RBP13.45□□□□□ -0.26
RPP40-206ENST00000483546 OR1F12Q8NHA8 337 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 PERPQ96FX8 193 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 COG8Q96MW5 612 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 TBCCD1Q9NVR7 557 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 MRPL22Q9NWU5 206 aaKnown RBP13.45□□□□□ -0.26
RPP40-206ENST00000483546 USE1Q9NZ43 259 aa13.45□□□□□ -0.26
RPP40-206ENST00000483546 SAC3D1A6NKF1 404 aa13.44□□□□□ -0.26
RPP40-206ENST00000483546 FAM171A2A8MVW0 826 aa13.44□□□□□ -0.26
RPP40-206ENST00000483546 RER1O15258 196 aa13.44□□□□□ -0.26
RPP40-206ENST00000483546 GLCEO94923 617 aa13.44□□□□□ -0.26
RPP40-206ENST00000483546 GPANK1O95872 356 aa13.44□□□□□ -0.26
RPP40-206ENST00000483546 CDKN1AP38936 164 aa13.44□□□□□ -0.26
RPP40-206ENST00000483546 RGS6P49758 472 aa13.44□□□□□ -0.26
RPP40-206ENST00000483546 ENTPD1P49961 510 aa13.44□□□□□ -0.26
RPP40-206ENST00000483546 SNAPC1Q16533 368 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms