RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OR10H5Q8NGA6 315 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 RBM4Q9BWF3 364 aaKnown RBP15.47■□□□□ 0.07
HDAC6-225ENST00000483506 RERGLQ9H628 205 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 SRA1Q9HD15 236 aaKnown RBP15.47■□□□□ 0.07
HDAC6-225ENST00000483506 ASH2LQ9UBL3 628 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 C5orf49A4QMS7 147 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 OR6C6A6NF89 314 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 SGCEO43556 437 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 SYNGR3O43761 229 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 CSF3P09919 207 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 ANXA8P13928 327 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 CCNIQ14094 377 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 SLC36A3Q495N2 470 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 CCDC121Q6ZUS5 278 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 ZNF101Q8IZC7 436 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 HS3ST5Q8IZT8 346 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 SLC37A3Q8NCC5 494 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 NMNAT2Q9BZQ4 307 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 FN3KQ9H479 309 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 KLHL21Q9UJP4 597 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 LHFPL6Q9Y693 200 aa15.46■□□□□ 0.07
HDAC6-225ENST00000483506 CHD3Q12873 2000 aaKnown RBP15.46■□□□□ 0.07
HDAC6-225ENST00000483506 H3BSA7 217 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 DOK2O60496 412 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 TIPRLO75663 272 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 GPANK1O95872 356 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 TFP02787 698 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 SLC25A1P53007 311 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 ATP6AP1Q15904 470 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 CCDC92Q53HC0 331 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-225ENST00000483506 UNQ6126/PRO20091Q6UXV3 157 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 LRP11Q86VZ4 500 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 OR2T4Q8NH00 348 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 TEX47Q8TBZ9 253 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 DNAJC9Q8WXX5 260 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 RAB1BQ9H0U4 201 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 MYOZ1Q9NP98 299 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-225ENST00000483506 CMC2Q9NRP2 79 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 MYEF2Q9P2K5 600 aaKnown RBP15.45■□□□□ 0.06
HDAC6-225ENST00000483506 EIF3KQ9UBQ5 218 aaKnown RBP15.45■□□□□ 0.06
HDAC6-225ENST00000483506 KCNG2Q9UJ96 466 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 NSD1Q96L73 2696 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-225ENST00000483506 TLN2Q9Y4G6 2542 aa15.45■□□□□ 0.06
HDAC6-225ENST00000483506 M0R233 179 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 LCKP06239 509 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 OSMP13725 252 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 CCNOP22674 350 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 GRK5P34947 590 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 GGT2P36268 569 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 ARHGDIAP52565 204 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 ERVS71-1P61550 626 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 TEKQ02763 1124 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 MEP1BQ16820 701 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 OTPQ5XKR4 325 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 CLEC2AQ6UVW9 174 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 RFPL4BQ6ZWI9 263 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 ZNF525Q8N782 197 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 CYB561A3Q8NBI2 242 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 GJC3Q8NFK1 279 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 SYNPRQ8TBG9 265 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 NEU4Q8WWR8 484 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-225ENST00000483506 C4orf45Q96LM5 186 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 VRK1Q99986 396 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-225ENST00000483506 SYT3Q9BQG1 590 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 REG4Q9BYZ8 158 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 MS4A5Q9H3V2 200 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 ZNF556Q9HAH1 456 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 DYNLRB1Q9NP97 96 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 MRPL22Q9NWU5 206 aaKnown RBP15.44■□□□□ 0.06
HDAC6-225ENST00000483506 PLEK2Q9NYT0 353 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 CYB5R1Q9UHQ9 305 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 AP4S1Q9Y587 144 aa15.44■□□□□ 0.06
HDAC6-225ENST00000483506 SETD2Q9BYW2 2564 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-225ENST00000483506 CR1P17927 2039 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 CSPG4Q6UVK1 2322 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 IGHV4-30-2A0A087WSY4 118 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 A0A096LNT2 108 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 FAM171A2A8MVW0 826 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 H3BN98 237 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 RER1O15258 196 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 CIB2O75838 187 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 IFNGP01579 166 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 IGHV3-13P01766 116 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 ERCC1P07992 297 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-225ENST00000483506 FCGR1AP12314 374 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 PRKACGP22612 351 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 TUBG1P23258 451 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 HTR5AP47898 357 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 CENPAP49450 140 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 KLF3P57682 345 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-225ENST00000483506 DBPQ10586 325 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-225ENST00000483506 CRMP1Q14194 572 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 KRTAP27-1Q3LI81 207 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 MBNL2Q5VZF2 373 aaKnown RBP15.43■□□□□ 0.06
HDAC6-225ENST00000483506 SLC18B1Q6NT16 456 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 SLC27A4Q6P1M0 643 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 FAHD1Q6P587 224 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 ARL9Q6T311 187 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 OR1J1Q8NGS3 322 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 OR1F12Q8NHA8 337 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms