RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 PGAM4Q8N0Y7 254 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 ZNF321PQ8N8H1 164 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 MORN4Q8NDC4 146 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 NFAM1Q8NET5 270 aaPredicted RBP6.48□□□□□ -1.37
LINC00888-203ENST00000482098 B3GNT7Q8NFL0 401 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 OR7G1Q8NGA0 311 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 OR8J3Q8NGG0 315 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 OR52B4Q8NGK2 314 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 OR52M1Q8NGK5 317 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 PNPT1Q8TCS8 783 aaKnown RBP6.48□□□□□ -1.37
LINC00888-203ENST00000482098 ZFP90Q8TF47 636 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 NCLNQ969V3 563 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 RFT1Q96AA3 541 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 NEURL3Q96EH8 262 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 GIMAP5Q96F15 307 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 SENP5Q96HI0 755 aaPredicted RBP6.48□□□□□ -1.37
LINC00888-203ENST00000482098 ANKRD27Q96NW4 1050 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 NMNAT2Q9BZQ4 307 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 OR8D2Q9GZM6 311 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 SIRPDQ9H106 197 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 IKZF5Q9H5V7 419 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 TPT1P8Q9HAU6 139 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 FOLH1BQ9HBA9 442 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 NDE1Q9NXR1 346 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 BCAP29Q9UHQ4 241 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 ZNF407Q9C0G0 2248 aa6.48□□□□□ -1.37
LINC00888-203ENST00000482098 CHD3Q12873 2000 aaKnown RBP6.47□□□□□ -1.37
LINC00888-203ENST00000482098 TRBV11-1A0A0K0K1C0 115 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 ARPC2O15144 300 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 MAGEB3O15480 346 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 CYTIPO60759 359 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 ATP5HO75947 161 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 KRT75O95678 551 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 HMGN2P05204 90 aaKnown RBP6.47□□□□□ -1.37
LINC00888-203ENST00000482098 SFTPBP07988 381 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 ACP2P11117 423 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 CBLP22681 906 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 PPIBP23284 216 aaKnown RBP6.47□□□□□ -1.37
LINC00888-203ENST00000482098 EMDP50402 254 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 SLC7A2P52569 658 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 PSME3P61289 254 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 NCALDP61601 193 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 FADDQ13158 208 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 EBPQ15125 230 aaKnown RBP6.47□□□□□ -1.37
LINC00888-203ENST00000482098 ODF4Q2M2E3 257 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 DNAL1Q4LDG9 190 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 C1orf185Q5T7R7 199 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 OR4A47Q6IF82 309 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 NANOGP8Q6NSW7 305 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 TNFAIP8L2Q6P589 184 aaPredicted RBP6.47□□□□□ -1.37
LINC00888-203ENST00000482098 ZNF66Q6ZN08 573 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 SLC22A16Q86VW1 577 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 RNF130Q86XS8 419 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 HIPK1Q86Z02 1210 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 MISPQ8IVT2 679 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 C9orf40Q8IXQ3 194 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 GPALPP1Q8IXQ4 340 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 DEFB107AQ8IZN7 70 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 KIF2BQ8N4N8 673 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 ZNF615Q8N8J6 731 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 APCDD1LQ8NCL9 501 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 MPLKIPQ8TAP9 179 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 MIPOL1Q8TD10 442 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 SGK494Q96LW2 274 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 VSTM2LQ96N03 204 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 GPA33Q99795 319 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 PIGQQ9BRB3 760 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 OR51I1Q9H343 314 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 RIMS4Q9H426 269 aaPredicted RBP6.47□□□□□ -1.37
LINC00888-203ENST00000482098 NANOGQ9H9S0 305 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 C1RLQ9NZP8 487 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 ABCD2Q9UBJ2 740 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 PRODH2Q9UF12 536 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 ZNF223Q9UK11 482 aaPredicted RBP6.47□□□□□ -1.37
LINC00888-203ENST00000482098 MRPS7Q9Y2R9 242 aaKnown RBP6.47□□□□□ -1.37
LINC00888-203ENST00000482098 GMEB1Q9Y692 573 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 KIAA1549Q9HCM3 1950 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 PKD1L1Q8TDX9 2849 aa6.47□□□□□ -1.37
LINC00888-203ENST00000482098 MGAM2Q2M2H8 2515 aa6.46□□□□□ -1.37
LINC00888-203ENST00000482098 ERICH4A6NGS2 130 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 EVPLLA8MZ36 301 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 FAM220BPB1ANY3 271 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 NME4O00746 187 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 GYG2O15488 501 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 TLX2O43763 284 aaPredicted RBP6.46□□□□□ -1.38
LINC00888-203ENST00000482098 PRKNO60260 465 aaPredicted RBP6.46□□□□□ -1.38
LINC00888-203ENST00000482098 HCN1O60741 890 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 PDE9AO76083 593 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 GLSO94925 669 aaPredicted RBP6.46□□□□□ -1.38
LINC00888-203ENST00000482098 PAX1P15863 534 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 GPX2P18283 190 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 HOXA5P20719 270 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 LMO1P25800 156 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 CEACAM8P31997 349 aaPredicted RBP6.46□□□□□ -1.38
LINC00888-203ENST00000482098 TIMP3P35625 211 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 MAGEA8P43361 318 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 DSTNP60981 165 aa6.46□□□□□ -1.38
LINC00888-203ENST00000482098 SEC61A1P61619 476 aaKnown RBP6.46□□□□□ -1.38
LINC00888-203ENST00000482098 PPIAP62937 165 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms