RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SLC3A1Q07837 685 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 HNRNPA0Q13151 305 aaKnown RBP12.93□□□□□ -0.34
LIMS3-203ENST00000480744 FHL1Q13642 323 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 ZBED5Q49AG3 693 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 ZMAT1Q5H9K5 638 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 DCAF12L2Q5VW00 463 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 C1orf229Q6ZS94 237 aaPredicted RBP12.93□□□□□ -0.34
LIMS3-203ENST00000480744 MBOAT2Q6ZWT7 520 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 CBLL1Q75N03 491 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 PEG10Q86TG7 708 aaKnown RBP12.93□□□□□ -0.34
LIMS3-203ENST00000480744 CYP4Z1Q86W10 505 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 C1orf174Q8IYL3 243 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 RNF113BQ8IZP6 322 aaKnown RBP12.93□□□□□ -0.34
LIMS3-203ENST00000480744 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 FAM162AQ96A26 154 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 Q96M85 177 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 ZNF570Q96NI8 536 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 CCT8L2Q96SF2 557 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 NDEL1Q9GZM8 345 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 RERGLQ9H628 205 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 CGGBP1Q9UFW8 167 aaPredicted RBP12.93□□□□□ -0.34
LIMS3-203ENST00000480744 ZDHHC8Q9ULC8 765 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 H3BSA7 217 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 UBOX5O94941 541 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 CD14P08571 375 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 ADRA2CP18825 462 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 GSTM3P21266 225 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 GSK3BP49841 420 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 LCN2P80188 198 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 TNFAIP6P98066 277 aaPredicted RBP12.92□□□□□ -0.34
LIMS3-203ENST00000480744 SCRN3Q0VDG4 424 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 SPRNQ5BIV9 151 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 MESTQ5EB52 335 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 MTX3Q5HYI7 312 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 OTPQ5XKR4 325 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 C8orf82Q6P1X6 216 aaPredicted RBP12.92□□□□□ -0.34
LIMS3-203ENST00000480744 SYT9Q86SS6 491 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 FAM46AQ96IP4 442 aaKnown RBP12.92□□□□□ -0.34
LIMS3-203ENST00000480744 DCLRE1CQ96SD1 692 aaKnown RBP12.92□□□□□ -0.34
LIMS3-203ENST00000480744 DIRC2Q96SL1 478 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 TMPRSS13Q9BYE2 586 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 POFUT1Q9H488 388 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 PCDHB10Q9UN67 800 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 ARL2BPQ9Y2Y0 163 aa12.92□□□□□ -0.34
LIMS3-203ENST00000480744 TEX13CA0A0J9YWL9 993 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 SGCEO43556 437 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 ICMTO60725 284 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 PRSS23O95084 383 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 FAM107AO95990 144 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 ADH4P08319 380 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 NCK1P16333 377 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 NUDT2P50583 147 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 PSG7Q13046 419 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 KRR1Q13601 381 aaKnown RBP12.91□□□□□ -0.34
LIMS3-203ENST00000480744 FGD3Q5JSP0 725 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 C1orf94Q6P1W5 598 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 TMPRSS11FQ6ZWK6 438 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 C1QL2Q7Z5L3 287 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 ZER1Q7Z7L7 766 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 NPEPL1Q8NDH3 523 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 ST7LQ8TDW4 575 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 ZFAND2BQ8WV99 257 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 RASD2Q96D21 266 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 HOPXQ9BPY8 73 aaPredicted RBP12.91□□□□□ -0.34
LIMS3-203ENST00000480744 KCTD14Q9BQ13 255 aaPredicted RBP12.91□□□□□ -0.34
LIMS3-203ENST00000480744 NMNAT1Q9HAN9 279 aaPredicted RBP12.91□□□□□ -0.34
LIMS3-203ENST00000480744 DCAF16Q9NXF7 216 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 PLEK2Q9NYT0 353 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 TMEM5Q9Y2B1 443 aa12.91□□□□□ -0.34
LIMS3-203ENST00000480744 PRSS37A4D1T9 235 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 J3QLI3 93 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 CD55P08174 381 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 SBK2P0C263 348 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 COX5BP10606 129 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 CTLA4P16410 223 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 ZNF26P17031 533 aaPredicted RBP12.9□□□□□ -0.34
LIMS3-203ENST00000480744 TNFSF4P23510 183 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 RBMXP38159 391 aaKnown RBP12.9□□□□□ -0.34
LIMS3-203ENST00000480744 BPIFB2Q8N4F0 458 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 OR2Z1Q8NG97 314 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 SLC7A6Q92536 515 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 C7orf69Q9H7B7 122 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 EFCAB1Q9HAE3 211 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 ARL8BQ9NVJ2 186 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 IL20RAQ9UHF4 553 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 KLHL21Q9UJP4 597 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 PURGQ9UJV8 347 aaKnown RBP12.9□□□□□ -0.34
LIMS3-203ENST00000480744 FAM32AQ9Y421 112 aaKnown RBP12.9□□□□□ -0.34
LIMS3-203ENST00000480744 NPTNQ9Y639 398 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 ENPP4Q9Y6X5 453 aa12.9□□□□□ -0.34
LIMS3-203ENST00000480744 TRIM77I1YAP6 450 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 SOCS2O14508 198 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 SLC16A7O60669 478 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 KHDRBS3O75525 346 aaKnown RBP12.89□□□□□ -0.35
LIMS3-203ENST00000480744 NDUFB2O95178 105 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 H1F0P07305 194 aaKnown RBP12.89□□□□□ -0.35
LIMS3-203ENST00000480744 HILS1P60008 231 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 CDK5R2Q13319 367 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 AQP6Q13520 282 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 VASH1Q7L8A9 365 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms