RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 HIST1H3AP68431 136 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 RNPS1Q15287 305 aaKnown RBP9.75□□□□□ -0.85
VTI1A-204ENST00000480057 DEFB109BQ30KR1 87 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 NRN1LQ496H8 165 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 HIST2H3PS2Q5TEC6 136 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 OR7E24Q6IFN5 339 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 SFXN4Q6P4A7 337 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 KLHL24Q6TFL4 600 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 HIST2H3AQ71DI3 136 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 AAED1Q7RTV5 226 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-204ENST00000480057 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-204ENST00000480057 MINDY2Q8NBR6 621 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 OR13C5Q8NGS8 318 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 SNIP1Q8TAD8 396 aaKnown RBP9.75□□□□□ -0.85
VTI1A-204ENST00000480057 CPT1CQ8TCG5 803 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 OR14A2Q96R54 314 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 PPIL3Q9H2H8 161 aaKnown RBP9.75□□□□□ -0.85
VTI1A-204ENST00000480057 SEC61A2Q9H9S3 476 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 GP6Q9HCN6 339 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 PARPBPQ9NWS1 579 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 ABRACLQ9P1F3 81 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 GDF2Q9UK05 429 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-204ENST00000480057 POLR1DQ9Y2S0 133 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 LHFPL6Q9Y693 200 aa9.75□□□□□ -0.85
VTI1A-204ENST00000480057 FREM3P0C091 2139 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 TRGV5A0A0B4J1U4 118 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 DVL2O14641 736 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 PIN1P1O15428 100 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 GFRA3O60609 400 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 UPK1BO75841 260 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 PNPP00491 289 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 OCM2P0CE71 109 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 UBCP0CG48 685 aaKnown RBP9.74□□□□□ -0.85
VTI1A-204ENST00000480057 SRMP19623 302 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 CFPP27918 469 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 RFC3P40938 356 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 SELENOPP49908 381 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 PSMA6P60900 246 aaKnown RBP9.74□□□□□ -0.85
VTI1A-204ENST00000480057 GRB2P62993 217 aaKnown RBP9.74□□□□□ -0.85
VTI1A-204ENST00000480057 RSPO4Q2I0M5 234 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-204ENST00000480057 RGS21Q2M5E4 152 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 CEP78Q5JTW2 689 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 FAM27D1Q5T7N8 215 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 FAM27BQ5VT28 67 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 TMEM244Q5VVB8 128 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 SYT9Q86SS6 491 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 LINC00346Q8IVM7 164 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 GPR137CQ8N3F9 429 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 ROBO4Q8WZ75 1007 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 NABP1Q96AH0 204 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 ZNF845Q96IR2 970 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-204ENST00000480057 SH3GL3Q99963 347 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 MIXL1Q9H2W2 232 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 BCO1Q9HAY6 547 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 ABCB9Q9NP78 766 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 NOX4Q9NPH5 578 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 G6PC2Q9NQR9 355 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 DDX28Q9NUL7 540 aaKnown RBP9.74□□□□□ -0.85
VTI1A-204ENST00000480057 OR52A1Q9UKL2 312 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 ZNF175Q9Y473 711 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 PCDHGA9Q9Y5G4 932 aaKnown RBP9.74□□□□□ -0.85
VTI1A-204ENST00000480057 V9GYH0 126 aa9.74□□□□□ -0.85
VTI1A-204ENST00000480057 A0A1B0GVC2 190 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 TMEM269A0A1B0GVZ9 245 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 EFSO43281 561 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 WNT11O96014 354 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 APOC1P02654 83 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 CD2P06729 351 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 CST2P09228 141 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 EPXP11678 715 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 FCGR2AP12318 317 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 FSTP19883 344 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 CDAP32320 146 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 THBS2P35442 1172 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 CAV3P56539 151 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 SCAND1P57086 179 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 MFGE8Q08431 387 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-204ENST00000480057 RIN1Q13671 783 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 PHYHD1Q5SRE7 291 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 IDNKQ5T6J7 187 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 XKRXQ6PP77 449 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 CFAP77Q6ZQR2 320 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 CHMP1BQ7LBR1 199 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 NR2C2APQ86WQ0 139 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 LAX1Q8IWV1 398 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 ZADH2Q8N4Q0 377 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 GDPD1Q8N9F7 314 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 GJC3Q8NFK1 279 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 OR10S1Q8NGN2 331 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 CHPT1Q8WUD6 406 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 SOSTQ9BQB4 213 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 LDAHQ9H6V9 325 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 TCF7L1Q9HCS4 588 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 EMC7Q9NPA0 242 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 PNRC2Q9NPJ4 139 aaKnown RBP9.73□□□□□ -0.85
VTI1A-204ENST00000480057 CENPMQ9NSP4 180 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 FAM206AQ9NX38 181 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 RABL2AQ9UBK7 228 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms