RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	CA10	Q9NS85	328 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	HIF1AN	Q9NWT6	349 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	MED29	Q9NX70	200 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	KLHL21	Q9UJP4	597 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF346	Q9UL40	294 aa	Known RBP	13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	MOK	Q9UQ07	419 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	IER3IP1	Q9Y5U9	82 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	CMYA5	Q8N3K9	4069 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	RIIAD1	A6NNX1	92 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	RPL36A-HNRNPH2	H7BZ11	118 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	PDLIM1	O00151	329 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	REN	P00797	406 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	IGHV3-9	P01782	118 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	ALPL	P05186	524 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	ITGA5	P08648	1049 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	HKR1	P10072	659 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	HLA-DOB	P13765	273 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	PAICS	P22234	425 aa	Known RBP	13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	POU1F1	P28069	291 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	GRK5	P34947	590 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	GIPR	P48546	466 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	DAP	P51397	102 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF84	P51523	738 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	CRISP1	P54107	249 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	MYBPC1	Q00872	1141 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	TOP3A	Q13472	1001 aa	Predicted RBP	13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	SLC36A3	Q495N2	470 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	CCDC36	Q8IYA8	594 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	HS3ST5	Q8IZT8	346 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	TXNDC15	Q96J42	360 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	PLEKHA8	Q96JA3	519 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	RASSF4	Q9H2L5	321 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	GLTP	Q9NZD2	209 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	REV1	Q9UBZ9	1251 aa		13.4	□□□□□ -0.26
HDLBP-238	ENST00000479894	WNT11	O96014	354 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	HOXB1	P14653	301 aa	Predicted RBP	13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	MPG	P29372	298 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	CRABP1	P29762	137 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	CENPA	P49450	140 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	SELENOP	P49908	381 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	CAMK2D	Q13557	499 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	KRR1	Q13601	381 aa	Known RBP	13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	TMEM123	Q8N131	208 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	NOXO1	Q8NFA2	376 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	UBASH3B	Q8TF42	649 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	TSPAN32	Q96QS1	320 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	EMC6	Q9BV81	110 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	MRPL13	Q9BYD1	178 aa	Known RBP	13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	ULBP2	Q9BZM5	246 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	EGLN3	Q9H6Z9	239 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	WNK1	Q9H4A3	2382 aa		13.39	□□□□□ -0.27
HDLBP-238	ENST00000479894	TEX13C	A0A0J9YWL9	993 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	PRSS37	A4D1T9	235 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	EI24	O14681	340 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	CASQ2	O14958	399 aa	Predicted RBP	13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	TRMU	O75648	421 aa	Known RBP	13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	PPP1R3D	O95685	299 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	MSMB	P08118	114 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	PGA4	P0DJD7	388 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	PGA3	P0DJD8	388 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZNF3	P17036	446 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	BLVRA	P53004	296 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	CD47	Q08722	323 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	GINS1	Q14691	196 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	ADIPOQ	Q15848	244 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	HIST3H3	Q16695	136 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	NRN1L	Q496H8	165 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	CLEC12A	Q5QGZ9	265 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	TSPO2	Q5TGU0	170 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	THSD4	Q6ZMP0	1018 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	FAM122B	Q7Z309	247 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	DPPA2	Q7Z7J5	298 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	IGFN1	Q86VF2	1251 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZNF519	Q8TB69	540 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	TMEM54	Q969K7	222 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	GABARAPL3	Q9BY60	117 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	SLC25A19	Q9HC21	320 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	SLC7A10	Q9NS82	523 aa		13.38	□□□□□ -0.27
HDLBP-238	ENST00000479894	NBEAL2	Q6ZNJ1	2754 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	BHLHE40	O14503	412 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	FARS2	O95363	451 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	SOX14	O95416	240 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	TF	P02787	698 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	OR4A8	P0C604	315 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZNF26	P17031	533 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	NPR2	P20594	1047 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	FOXG1	P55316	489 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	FXYD6P3	P58550	94 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	CDC42	P60953	191 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	CDK5	Q00535	292 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	ROR2	Q01974	943 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	NPRL3	Q12980	569 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	MELK	Q14680	651 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	CARD17	Q5XLA6	110 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	KLHL24	Q6TFL4	600 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZDHHC22	Q8N966	263 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	ZNF555	Q8NEP9	628 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894	BOD1	Q96IK1	185 aa		13.37	□□□□□ -0.27
HDLBP-238	ENST00000479894		Q96M85	177 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms