RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 LINC00346Q8IVM7 164 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 WFDC11Q8NEX6 87 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 SLC26A10Q8NG04 563 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 OR2T4Q8NH00 348 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 RBM4Q9BWF3 364 aaKnown RBP16.27■□□□□ 0.2
AGRN-208ENST00000479707 CDADC1Q9BWV3 514 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 GRIP2Q9C0E4 1043 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 ZNF442Q9H7R0 627 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 CMC2Q9NRP2 79 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 KRT84Q9NSB2 600 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 PLEK2Q9NYT0 353 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 CMAHPQ9Y471 501 aa16.27■□□□□ 0.2
AGRN-208ENST00000479707 RER1O15258 196 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 LCKP06239 509 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 ZNF3P17036 446 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 GLRXP35754 106 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 HTR5AP47898 357 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 CRISP1P54107 249 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 UCP2P55851 309 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 ERVS71-1P61550 626 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 CDK5Q00535 292 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 SWI5Q1ZZU3 235 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 CCDC92Q53HC0 331 aaPredicted RBP16.26■□□□□ 0.19
AGRN-208ENST00000479707 ZFP1Q6P2D0 407 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 LYPD4Q6UWN0 246 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 KRTAP1-3Q8IUG1 177 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 SVOPLQ8N434 492 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 DNAJC9Q8WXX5 260 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 WACQ9BTA9 647 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 HCAR1Q9BXC0 346 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 PLK3Q9H4B4 646 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 MRPL22Q9NWU5 206 aaKnown RBP16.26■□□□□ 0.19
AGRN-208ENST00000479707 OAZ3Q9UMX2 235 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 LHFPL6Q9Y693 200 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 PMF1-BGLAPU3KQ54 211 aa16.26■□□□□ 0.19
AGRN-208ENST00000479707 B9A039 149 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 SNAP29O95721 258 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 PAX1P15863 534 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 ZNF823P16415 610 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 SPI1P17947 270 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 WNT5AP41221 380 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 RPS27P42677 84 aaKnown RBP16.25■□□□□ 0.19
AGRN-208ENST00000479707 SNRPD2P62316 118 aaKnown RBP16.25■□□□□ 0.19
AGRN-208ENST00000479707 RAB35Q15286 201 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 SHEQ5VZ18 495 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 TMEM154Q6P9G4 183 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 SPNS3Q6ZMD2 512 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 VASH1Q7L8A9 365 aaPredicted RBP16.25■□□□□ 0.19
AGRN-208ENST00000479707 LRP11Q86VZ4 500 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 C10orf67Q8IYJ2 551 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 SLC7A6Q92536 515 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 SYT3Q9BQG1 590 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 MRPL37Q9BZE1 423 aaKnown RBP16.25■□□□□ 0.19
AGRN-208ENST00000479707 NMNAT2Q9BZQ4 307 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 GABARAPL1Q9H0R8 117 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 EIF3KQ9UBQ5 218 aaKnown RBP16.25■□□□□ 0.19
AGRN-208ENST00000479707 DUSP13Q9UII6 198 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 ARFGEF3Q5TH69 2177 aa16.25■□□□□ 0.19
AGRN-208ENST00000479707 TMEM129A0AVI4 362 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 ANKRD65E5RJM6 399 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 SURF4O15260 269 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 IGHV4-39P01824 125 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 HMGN1P05114 100 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 BMP4P12644 408 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 RAD52P43351 418 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 SLC25A1P53007 311 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 RPS23P62266 143 aaKnown RBP16.24■□□□□ 0.19
AGRN-208ENST00000479707 PTGES3Q15185 160 aaKnown RBP16.24■□□□□ 0.19
AGRN-208ENST00000479707 EFNB3Q15768 340 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 KDM4DQ6B0I6 523 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 RGS7BPQ6MZT1 257 aaPredicted RBP16.24■□□□□ 0.19
AGRN-208ENST00000479707 ZNF101Q8IZC7 436 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 ZNF511Q8NB15 262 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 GJC3Q8NFK1 279 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 OR1J1Q8NGS3 322 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 OR6K6Q8NGW6 343 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 OR2AJ1Q8NGZ0 328 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 PTP4A1Q93096 173 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 MRPL24Q96A35 216 aaKnown RBP16.24■□□□□ 0.19
AGRN-208ENST00000479707 PLEKHA8Q96JA3 519 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 VRK1Q99986 396 aaPredicted RBP16.24■□□□□ 0.19
AGRN-208ENST00000479707 OR51V1Q9H2C8 321 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 SLC25A19Q9HC21 320 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 S100A14Q9HCY8 104 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 TVP23BQ9NYZ1 205 aa16.24■□□□□ 0.19
AGRN-208ENST00000479707 NDRG4Q9ULP0 352 aaKnown RBP16.24■□□□□ 0.19
AGRN-208ENST00000479707 OTOGQ6ZRI0 2925 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 PRR23D1E9PI22 279 aaPredicted RBP16.23■□□□□ 0.19
AGRN-208ENST00000479707 SYNGR3O43761 229 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 PRR23D2P0DMB1 279 aaPredicted RBP16.23■□□□□ 0.19
AGRN-208ENST00000479707 PCSK6P29122 969 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 FMO3P31513 532 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 GGT2P36268 569 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 SNAPC1Q16533 368 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 SPATA46Q5T0L3 261 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 PLBD1Q6P4A8 553 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 TGIF2LYQ8IUE0 185 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 PARP8Q8N3A8 854 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 OR1F12Q8NHA8 337 aa16.23■□□□□ 0.19
AGRN-208ENST00000479707 C4orf45Q96LM5 186 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms