RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PPA1Q15181 289 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 TAB1Q15750 504 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 KRTAP27-1Q3LI81 207 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 LCN1P1Q5VSP4 162 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 KLHL24Q6TFL4 600 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 ZNF813Q6ZN06 617 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 ZNF704Q6ZNC4 412 aaPredicted RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 IGFN1Q86VF2 1251 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 MEX3DQ86XN8 651 aaKnown RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 ZNF454Q8N9F8 522 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 SDR9C7Q8NEX9 313 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 OR52E2Q8NGJ4 325 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 OR4K13Q8NH42 304 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 RHOXF1Q8NHV9 184 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 NRG4Q8WWG1 115 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 TFAP2CQ92754 450 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 PTP4A1Q93096 173 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 RFKQ969G6 155 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 S100PBPQ96BU1 408 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 ZNF837Q96EG3 531 aaPredicted RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 DCLRE1CQ96SD1 692 aaKnown RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 APOL4Q9BPW4 351 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 ADI1Q9BV57 179 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 ANKRD60Q9BZ19 345 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 HDHD2Q9H0R4 259 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 TOR3AQ9H497 397 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 HINT3Q9NQE9 182 aaKnown RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 DDX28Q9NUL7 540 aaKnown RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 FAM118AQ9NWS6 357 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 NKX1-2Q9UD57 310 aaPredicted RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 WARS2Q9UGM6 360 aaKnown RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 IL20RAQ9UHF4 553 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 FBXO9Q9UK97 447 aaPredicted RBP7.74□□□□□ -1.17
DDX56-211ENST00000479602 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.74□□□□□ -1.17
DDX56-211ENST00000479602 COMMD3-BMI1R4GMX3 469 aa7.74□□□□□ -1.17
DDX56-211ENST00000479602 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.176e-16■■■■□ 21.6
DDX56-211ENST00000479602 CIB4A0PJX0 185 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 C12orf71A8MTZ7 269 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 INAFM1C9JVW0 142 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 HS3ST1O14792 307 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 SLC16A7O60669 478 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 CRLF1O75462 422 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 SERPINI2O75830 405 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 LYZL6O75951 148 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 SLC2A10O95528 541 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 SERPINA5P05154 406 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 IGFBP1P08833 259 aaPredicted RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 ZNF14P17017 642 aaPredicted RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 HTR1FP30939 366 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 CAPGP40121 348 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 VHLP40337 213 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 FOXG1P55316 489 aaPredicted RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 FMODQ06828 376 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 ENDOGQ14249 297 aaKnown RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 SNAPC1Q16533 368 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 GSG1Q2KHT4 349 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 NCMAPQ5T1S8 102 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 ZNF691Q5VV52 312 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 DEGS2Q6QHC5 323 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 TMEM108Q6UXF1 575 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 CXXC5Q7LFL8 322 aaKnown RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 SHFQ7M4L6 423 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 TIGD4Q8IY51 512 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 DHRSXQ8N5I4 330 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 SYT14Q8NB59 555 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 HAVCR2Q8TDQ0 301 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 PERPQ96FX8 193 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 ZC3HAV1LQ96H79 300 aaKnown RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 PLEKHA8Q96JA3 519 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 Q96MT0 163 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 MYCBPQ99417 103 aaPredicted RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 COQ7Q99807 217 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 UBTD1Q9HAC8 227 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 RPRD1BQ9NQG5 326 aaKnown RBP7.73□□□□□ -1.17
DDX56-211ENST00000479602 RAB26Q9ULW5 256 aa7.73□□□□□ -1.17
DDX56-211ENST00000479602 OR6C6A6NF89 314 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 PHYHO14832 338 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 PRKYO43930 277 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 RAD51DO75771 328 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 CD8AP01732 235 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 IGHV3-9P01782 118 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 SOD3P08294 240 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 PIPP12273 146 aaPredicted RBP7.72□□□□□ -1.17
DDX56-211ENST00000479602 B4GALT1P15291 398 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 FMO3P31513 532 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 NUDT6P53370 316 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 UBE2NP61088 152 aaKnown RBP7.72□□□□□ -1.17
DDX56-211ENST00000479602 ISL1P61371 349 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 CSNK2BP67870 215 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 ROM1Q03395 351 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 TNK1Q13470 666 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 TMEM53Q6P2H8 277 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 SLC16A14Q7RTX9 510 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 SKA3Q8IX90 412 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 IQCF1Q8N6M8 205 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 ZNF555Q8NEP9 628 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 NUP37Q8NFH4 326 aa7.72□□□□□ -1.17
DDX56-211ENST00000479602 GJC3Q8NFK1 279 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms