RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 NSMAFQ92636 917 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 YIPF5Q969M3 257 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 NABP1Q96AH0 204 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
ATG4B-218ENST00000479554 RDH12Q96NR8 316 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 TSPAN32Q96QS1 320 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 ALG12Q9BV10 488 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 BCL2L14Q9BZR8 327 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 GABARAPL1Q9H0R8 117 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 NARFLQ9H6Q4 476 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 SMPD3Q9NY59 655 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-218ENST00000479554 SLCO1C1Q9NYB5 712 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 NDUFAF4Q9P032 175 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 SAMHD1Q9Y3Z3 626 aaKnown RBP12.27□□□□□ -0.45
ATG4B-218ENST00000479554 FAM32AQ9Y421 112 aaKnown RBP12.27□□□□□ -0.45
ATG4B-218ENST00000479554 UGT2A1Q9Y4X1 527 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 ENPP4Q9Y6X5 453 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 IGLV3-9A0A075B6K5 115 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 IGKV1D-43A0A0B4J1Z2 117 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 DIRAS1O95057 198 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 IGHMP01871 453 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 ALPLP05186 524 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 RHCEP18577 417 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 PCMT1P22061 227 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 CCNOP22674 350 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 COL8A2P25067 703 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 MAGEB1P43366 347 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 YAP1P46937 504 aaKnown RBP12.26□□□□□ -0.45
ATG4B-218ENST00000479554 RPL27P61353 136 aaKnown RBP12.26□□□□□ -0.45
ATG4B-218ENST00000479554 MRPS11P82912 194 aaKnown RBP12.26□□□□□ -0.45
ATG4B-218ENST00000479554 SGCAQ16586 387 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 PCGF3Q3KNV8 242 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 KRTAP24-1Q3LI83 254 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 TMEM154Q6P9G4 183 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 TSEN54Q7Z6J9 526 aaKnown RBP12.26□□□□□ -0.45
ATG4B-218ENST00000479554 TMEM179BQ7Z7N9 219 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 IGFN1Q86VF2 1251 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 OR1J1Q8NGS3 322 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 CLDND2Q8NHS1 167 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 C1orf159Q96HA4 380 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 FNDC11Q9BVV2 318 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF416Q9BWM5 594 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 HINT3Q9NQE9 182 aaKnown RBP12.26□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF275Q9NSD4 429 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-218ENST00000479554 VNN3Q9NY84 501 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 RHCGQ9UBD6 479 aa12.26□□□□□ -0.45
ATG4B-218ENST00000479554 TMEFF2Q9UIK5 374 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-218ENST00000479554 TRAV27A0A087WT01 109 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 C17orf100A8MU93 164 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 B4DSR2 109 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 J3KTA2 159 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 DLGAP1O14490 977 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 PPIHO43447 177 aaKnown RBP12.25□□□□□ -0.45
ATG4B-218ENST00000479554 TFP02787 698 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 MT-ND5P03915 603 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF32P17041 273 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 MAKP20794 623 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 STOMP27105 288 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 SRP14P37108 136 aaKnown RBP12.25□□□□□ -0.45
ATG4B-218ENST00000479554 DVL1P1P54792 670 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-218ENST00000479554 TMEM33P57088 247 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 CTXN1P60606 82 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 CCL8P80075 99 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 TRAM2Q15035 370 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 RFX4Q33E94 735 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 FAM205BPQ63HN1 556 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 SLC25A47Q6Q0C1 308 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 GLCCI1Q86VQ1 547 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 CYP4Z1Q86W10 505 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 NRMQ8IXM6 262 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 DHRSXQ8N5I4 330 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 CPEB3Q8NE35 698 aaKnown RBP12.25□□□□□ -0.45
ATG4B-218ENST00000479554 OR51A7Q8NH64 312 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 AKR7LQ8NHP1 331 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 FNDC8Q8TC99 324 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 TFAP2CQ92754 450 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 RBP7Q96R05 134 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 ADI1Q9BV57 179 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 MAN2C1Q9NTJ4 1040 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 ORC6Q9Y5N6 252 aa12.25□□□□□ -0.45
ATG4B-218ENST00000479554 C5orf49A4QMS7 147 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 MAGEA13PA6NCF6 341 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 EFCAB9A8MZ26 197 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 H0YAE9 185 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 TNFRSF11BO00300 401 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 RP2O75695 350 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 FUT4P22083 530 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 RRM2P31350 389 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 CAPGP40121 348 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 GUCA1AP43080 201 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-218ENST00000479554 GDI2P50395 445 aaKnown RBP12.24□□□□□ -0.45
ATG4B-218ENST00000479554 RAD23AP54725 363 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 ERVK-25P63136 954 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 SPIBQ01892 262 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 GLO1Q04760 184 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 PPP1R8Q12972 351 aaKnown RBP12.24□□□□□ -0.45
ATG4B-218ENST00000479554 MOGQ16653 247 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 ANKDD1AQ495B1 522 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 THEM4Q5T1C6 240 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF730Q6ZMV8 503 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms