RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 RAB3IPQ96QF0 476 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-217ENST00000479161 CACNG6Q9BXT2 260 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 GABARAPL1Q9H0R8 117 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 SRA1Q9HD15 236 aaKnown RBP13.34□□□□□ -0.27
C9orf3-217ENST00000479161 RPRD1BQ9NQG5 326 aaKnown RBP13.34□□□□□ -0.27
C9orf3-217ENST00000479161 ENOPH1Q9UHY7 261 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 LOC100509620A0A075B734 347 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 RIIAD1A6NNX1 92 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 G3V2T6 193 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 SGCEO43556 437 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 SOX14O95416 240 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 ZNF3P17036 446 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 APEX1P27695 318 aaKnown RBP13.33□□□□□ -0.28
C9orf3-217ENST00000479161 GDI2P50395 445 aaKnown RBP13.33□□□□□ -0.28
C9orf3-217ENST00000479161 DSCR9P59020 149 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 ESRRGP62508 458 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 PCK2Q16822 640 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 TEX30Q5JUR7 227 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 Q5PR19 223 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 SLC35F1Q5T1Q4 408 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 UGT2A3Q6UWM9 527 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 ATG16L2Q8NAA4 619 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 SLC37A3Q8NCC5 494 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 PERPQ96FX8 193 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 DCLRE1CQ96SD1 692 aaKnown RBP13.33□□□□□ -0.28
C9orf3-217ENST00000479161 TEX12Q9BXU0 123 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 ELOVL3Q9HB03 270 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 SLC25A19Q9HC21 320 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 EIF3KQ9UBQ5 218 aaKnown RBP13.33□□□□□ -0.28
C9orf3-217ENST00000479161 CYB5R1Q9UHQ9 305 aa13.33□□□□□ -0.28
C9orf3-217ENST00000479161 IGLV3-9A0A075B6K5 115 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 OR6C6A6NF89 314 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 H3BN98 237 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 SYNGR3O43761 229 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 IGFBP1P08833 259 aaPredicted RBP13.32□□□□□ -0.28
C9orf3-217ENST00000479161 PRKACGP22612 351 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 TEKQ02763 1124 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 ECH1Q13011 328 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 RAB35Q15286 201 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 MOGQ16653 247 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 KDM4DQ6B0I6 523 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 KRT80Q6KB66 452 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 VASH1Q7L8A9 365 aaPredicted RBP13.32□□□□□ -0.28
C9orf3-217ENST00000479161 HS3ST5Q8IZT8 346 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 COG8Q96MW5 612 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 HDHD2Q9H0R4 259 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 EMC7Q9NPA0 242 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 DLL4Q9NR61 685 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 PAPOLBQ9NRJ5 636 aaKnown RBP13.32□□□□□ -0.28
C9orf3-217ENST00000479161 ASH2LQ9UBL3 628 aa13.32□□□□□ -0.28
C9orf3-217ENST00000479161 MTORP42345 2549 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 MPZL1O95297 269 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 F12P00748 615 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-217ENST00000479161 IGHV4-39P01824 125 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 TFP02787 698 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 GGT2P36268 569 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 CDKN1AP38936 164 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 ERFP50548 548 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 DAPP51397 102 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 EFNA4P52798 201 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 SELENOVP59797 346 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 CRMP1Q14194 572 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 GINS1Q14691 196 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 RGS7BPQ6MZT1 257 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-217ENST00000479161 ZNF774Q6NX45 483 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 RHOUQ7L0Q8 258 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 PAQR4Q8N4S7 273 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-217ENST00000479161 WFDC11Q8NEX6 87 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 OR10H5Q8NGA6 315 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 AKR7LQ8NHP1 331 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 COQ7Q99807 217 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 RERGLQ9H628 205 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 MYOZ1Q9NP98 299 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-217ENST00000479161 PLEK2Q9NYT0 353 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 GPR160Q9UJ42 338 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 LHFPL6Q9Y693 200 aa13.31□□□□□ -0.28
C9orf3-217ENST00000479161 C5orf49A4QMS7 147 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 SURF4O15260 269 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 GPRIN2O60269 458 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 DOK2O60496 412 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 CSF3P09919 207 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 CD99P14209 185 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 SPI1P17947 270 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 PAICSP22234 425 aaKnown RBP13.3□□□□□ -0.28
C9orf3-217ENST00000479161 FMO3P31513 532 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 RGS6P49758 472 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 CRISP1P54107 249 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 KPNB1Q14974 876 aaKnown RBP13.3□□□□□ -0.28
C9orf3-217ENST00000479161 KRTAP27-1Q3LI81 207 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-217ENST00000479161 ELFN2Q5R3F8 820 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 MBNL2Q5VZF2 373 aaKnown RBP13.3□□□□□ -0.28
C9orf3-217ENST00000479161 SLC18B1Q6NT16 456 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 ACSM5Q6NUN0 579 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 VHLLQ6RSH7 139 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 CYB561A3Q8NBI2 242 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 PROKR2Q8NFJ6 384 aa13.3□□□□□ -0.28
C9orf3-217ENST00000479161 OR1F12Q8NHA8 337 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms