RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 POU3F1Q03052 451 aaPredicted RBP9.68□□□□□ -0.86
VPS52-217ENST00000478934 COL19A1Q14993 1142 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 ZMYND11Q15326 602 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 RAB11BQ15907 218 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 TEX30Q5JUR7 227 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 LCN10Q6JVE6 187 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 SLC36A1Q7Z2H8 476 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 GRINAQ7Z429 371 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 OR4S1Q8NGB4 309 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 SLC25A28Q96A46 364 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 SLC41A2Q96JW4 573 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 PHF7Q9BWX1 381 aaPredicted RBP9.68□□□□□ -0.86
VPS52-217ENST00000478934 SLC7A5P2Q9GIP4 190 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 TINAGL1Q9GZM7 467 aaPredicted RBP9.68□□□□□ -0.86
VPS52-217ENST00000478934 RAB33BQ9H082 229 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 EXO5Q9H790 373 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 C12orf10Q9HB07 376 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 GPN1Q9HCN4 374 aaPredicted RBP9.68□□□□□ -0.86
VPS52-217ENST00000478934 DIABLOQ9NR28 239 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 VSX1Q9NZR4 365 aaPredicted RBP9.68□□□□□ -0.86
VPS52-217ENST00000478934 KCNN3Q9UGI6 736 aa9.68□□□□□ -0.86
VPS52-217ENST00000478934 CPAMD8Q8IZJ3 1885 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 A0A1W2PQD3 144 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 CPED1A4D0V7 1026 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 P2RY10O00398 339 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 NUDT21O43809 227 aaKnown RBP9.67□□□□□ -0.86
VPS52-217ENST00000478934 SPDEFO95238 335 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 SORDQ00796 357 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 HLXQ14774 488 aaPredicted RBP9.67□□□□□ -0.86
VPS52-217ENST00000478934 RBMS2Q15434 407 aaKnown RBP9.67□□□□□ -0.86
VPS52-217ENST00000478934 NKPD1Q17RQ9 610 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 LRRC37A5PQ49AS3 106 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 SCGB2B2Q4G0G5 96 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 NHLRC3Q5JS37 347 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 TSSK4Q6SA08 328 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 CATSPERDQ86XM0 798 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 TDHQ8IZJ6 230 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 GALNT16Q8N428 558 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 RELL2Q8NC24 303 aaPredicted RBP9.67□□□□□ -0.86
VPS52-217ENST00000478934 RBPMSQ93062 196 aaKnown RBP9.67□□□□□ -0.86
VPS52-217ENST00000478934 CMBLQ96DG6 245 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 SLC25A44Q96H78 314 aaPredicted RBP9.67□□□□□ -0.86
VPS52-217ENST00000478934 POFUT1Q9H488 388 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 OPN4Q9UHM6 478 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 FBXL2Q9UKC9 423 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 A0A1W2PPC1 479 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 TMEM200CA6NKL6 621 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 TSPAN4O14817 238 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 MT-ATP6P00846 226 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 LPLP06858 475 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 GIPP09681 153 aaPredicted RBP9.67□□□□□ -0.86
VPS52-217ENST00000478934 ZNF28P17035 718 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 RIDAP52758 137 aaKnown RBP9.67□□□□□ -0.86
VPS52-217ENST00000478934 SLC26A5P58743 744 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 FOXF1Q12946 379 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 MFSD13AQ14CX5 517 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 SLC22A6Q4U2R8 563 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 BEX5Q5H9J7 111 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 LIN54Q6MZP7 749 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 JAGN1Q8N5M9 183 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 FAM46BQ96A09 425 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 MVB12AQ96EY5 273 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 CMKLR1Q99788 373 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 CHRNA10Q9GZZ6 450 aa9.67□□□□□ -0.86
VPS52-217ENST00000478934 SLC17A2O00624 439 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 CCSO14618 274 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 KCNAB3O43448 404 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 DCNP07585 359 aaKnown RBP9.66□□□□□ -0.86
VPS52-217ENST00000478934 CPN1P15169 458 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 GLB1P16278 677 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 PRSS3P35030 304 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 EPHA4P54764 986 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 SEC61A1P61619 476 aaKnown RBP9.66□□□□□ -0.86
VPS52-217ENST00000478934 SHBQ15464 509 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 RALGAPA1Q6GYQ0 2036 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 FAM166AQ6J272 317 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 IDO2Q6ZQW0 420 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 DNM1P46Q6ZS02 220 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 TMUB2Q71RG4 321 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 SPICQ8N5J4 248 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 ACBD4Q8NC06 268 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 CADM4Q8NFZ8 388 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 OR2AK2Q8NG84 335 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 OR13C3Q8NGS6 347 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 OR52N5Q8NH56 324 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 WBP1Q96G27 269 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 OR6C1Q96RD1 312 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 SOX7Q9BT81 388 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 SDHAF2Q9NX18 166 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 LOC100289279A0A1B0GTE1 492 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 LOC107986453A0A1B0GWG9 222 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 UBE2QL1A1L167 161 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 TMEM235A6NFC5 223 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 WIPF3A6NGB9 483 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 BCAT2O15382 392 aaPredicted RBP9.66□□□□□ -0.86
VPS52-217ENST00000478934 SRSF10O75494 262 aaKnown RBP9.66□□□□□ -0.86
VPS52-217ENST00000478934 ZNF432O94892 652 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 OR2A4O95047 310 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 ROM1Q03395 351 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 GLO1Q04760 184 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms