RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RNF126Q9BV68 326 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PDFQ9HBH1 243 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 MRPL47Q9HD33 250 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 TM9SF3Q9HD45 589 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 FANCFQ9NPI8 374 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 DYRK4Q9NR20 520 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PARVAQ9NVD7 372 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 FBXL12Q9NXK8 326 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 TMEM9Q9P0T7 183 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 MEMO1Q9Y316 297 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 PLLPQ9Y342 182 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 NEUROG3Q9Y4Z2 214 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 DNAH14Q0VDD8 3507 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 SDK2Q58EX2 2172 aa2.9□□□□□ -1.95
CDC42BPA-212ENST00000478573 ANKRD12Q6UB98 2062 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 CHD8Q9HCK8 2581 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A1B0GTQ1 180 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A1W2PQ67 120 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 TRDCB7Z8K6 153 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 PRAMEF26H0Y7S4 382 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 NBR2O15453 112 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 HCRTR1O43613 425 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR10H3O60404 316 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 CD160O95971 181 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 GYPCP04921 128 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 CTSLP07711 333 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 PLEKP08567 350 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 ALOX5P09917 674 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 ADRB3P13945 408 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 COX5AP20674 150 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR1E1P30953 314 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 HSPA9P38646 679 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 CSNK1DP48730 415 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 HCAR3P49019 387 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCNHP51946 323 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 IGLV3-21P80748 117 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 TNFRSF17Q02223 184 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 RAD51Q06609 339 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 PIGHQ14442 188 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 TRIM16LQ309B1 348 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 CARD16Q5EG05 197 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 PIP5KL1Q5T9C9 394 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 DCUN1D2Q6PH85 259 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 WDR59Q6PJI9 974 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 WDR74Q6RFH5 385 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 TRPM8Q7Z2W7 1104 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF571Q7Z3V5 609 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 HORMAD1Q86X24 394 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 MMAAQ8IVH4 418 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 LRRC8AQ8IWT6 810 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC35F2Q8IXU6 374 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 UMODL1-AS1Q8N2C9 162 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 STK40Q8N2I9 435 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR2AP1Q8NGE2 309 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR13C2Q8NGS9 318 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 HTR3CQ8WXA8 447 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 MS4A14Q96JA4 679 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC39A3Q9BRY0 314 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 SNRNP25Q9BV90 132 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 EHD1Q9H4M9 534 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 HAUS4Q9H6D7 363 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 LRRC19Q9H756 370 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 YY1AP1Q9H869 796 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 FN3KRPQ9HA64 309 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 UVRAGQ9P2Y5 699 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR12D3Q9UGF7 316 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 HPCAL4Q9UM19 191 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 PRPF19Q9UMS4 504 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 PTPRQQ9UMZ3 2332 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 VSIG4Q9Y279 399 aa2.89□□□□□ -1.95
CDC42BPA-212ENST00000478573 IGF2RP11717 2491 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 APC2O95996 2303 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 AKAP13Q12802 2813 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCDC88CQ9P219 2028 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A0D9SEW6 157 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 FAM240BA0A1B0GVZ2 78 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 VSTM2BA6NLU5 285 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 SNTNA6NMZ2 147 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 KPNA3O00505 521 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 KDELR3O43731 214 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 FCMRO60667 390 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 RAMP3O60896 148 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 B4GALT2O60909 372 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 AP2A1O95782 977 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 RPS2P15880 293 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 TEAD1P28347 426 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 GCAP28676 217 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 NTSP30990 170 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 UGT1A5P35504 534 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 RPL13AP40429 203 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 ARRB1P49407 418 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 DUSP3P51452 185 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 HADHBP55084 474 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 C21orf59P57076 290 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 RHOAP61586 193 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 AP1S1P61966 158 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 RPL23AP62750 156 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 RPS21P63220 83 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 OGDHQ02218 1023 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC25A11Q02978 314 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms