RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SUMO3P55854 103 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-208ENST00000478423 CDK5Q00535 292 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 OXA1LQ15070 435 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-208ENST00000478423 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-208ENST00000478423 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 SFTPA2Q8IWL1 248 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 ZADH2Q8N4Q0 377 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 OR52N5Q8NH56 324 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 HDGFL3Q9Y3E1 203 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-208ENST00000478423 CBR3O75828 277 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 GABRA2P47869 451 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 ZNF117Q03924 483 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 DHRS13Q6UX07 377 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 SLC7A5P1Q8MH63 180 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 CADM3Q8N126 398 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 CDX2Q99626 313 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-208ENST00000478423 ABHD6Q9BV23 337 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 BOLA1Q9Y3E2 137 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 TDRD6O60522 2096 aaKnown RBP12.88□□□□□ -0.35
NPHP4-208ENST00000478423 GPR179Q6PRD1 2367 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 SDK2Q58EX2 2172 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 A0A0B4J203 849 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 IFITM5A6NNB3 132 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 CD300LBA8K4G0 201 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 GABARAPH6UMI1 98 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 H7C2Y5 167 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 UBBP0CG47 229 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 EVX1P49640 407 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 EGR3Q06889 387 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 SEMA6DQ8NFY4 1073 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 OR1J2Q8NGS2 313 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 ZNF764Q96H86 408 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-208ENST00000478423 TMEM43Q9BTV4 400 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 SMOC1Q9H4F8 434 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 DYNLRB1Q9NP97 96 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 GPR160Q9UJ42 338 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 TRAPPC2LQ9UL33 140 aa12.88□□□□□ -0.35
NPHP4-208ENST00000478423 ACACAQ13085 2346 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 HRO43593 1189 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 IFNA2P01563 188 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 DGCR2P98153 550 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 SMIM3Q9BZL3 60 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 FBXL2Q9UKC9 423 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 PCOLCE2Q9UKZ9 415 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 AIPO00170 330 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 SSX5O60225 188 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 CALCBP10092 127 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.35
NPHP4-208ENST00000478423 CLDN15P56746 228 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 DUSP2Q05923 314 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 CLN3Q13286 438 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 IL11RAQ14626 422 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 OR10G3Q8NGC4 313 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 SECTM1Q8WVN6 248 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 RGCCQ9H4X1 137 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 NBASA2RRP1 2371 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 ZNF780AO75290 641 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-208ENST00000478423 IGHA2P01877 340 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 CLVS2Q5SYC1 327 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 GON7Q9BXV9 100 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 NELFAQ9H3P2 528 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 ASF1BQ9NVP2 202 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 SLCO1C1Q9NYB5 712 aa12.87□□□□□ -0.35
NPHP4-208ENST00000478423 ARPC3O15145 178 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 DHHO43323 396 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 LILRB5O75023 590 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 TSPAN15O95858 294 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 EDN3P14138 238 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 ERVK-16P61578 105 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 OR10K2Q6IF99 312 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 WDR88Q6ZMY6 472 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 OR1M1Q8NGA1 313 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 OR51S1Q8NGJ8 323 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 GNRHR2Q96P88 292 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 SLC25A21Q9BQT8 299 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-208ENST00000478423 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 LANCL2Q9NS86 450 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 KIF13BQ9NQT8 1826 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 TRIM64A6NGJ6 449 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 AGPAT2O15120 278 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 NXPH2O95156 264 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 FAPQ12884 760 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 IL10RAQ13651 578 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 GK2Q14410 553 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-208ENST00000478423 C1orf210Q8IVY1 113 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 ATF6BQ99941 703 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 SEC22CQ9BRL7 303 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 RAB9BQ9NP90 201 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 TMEM235A6NFC5 223 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 ANKUB1A6NFN9 424 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 E9PI62 339 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 CDC42EP2O14613 210 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 LIMS3P0CW19 117 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms