RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 FOXH1O75593 365 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 MPV17P39210 176 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 YAP1P46937 504 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 RGS6P49758 472 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 SLC7A2P52569 658 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 HILS1P60008 231 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 ZNF774Q6NX45 483 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 PGM2L1Q6PCE3 622 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 DNM1P34Q6PK57 102 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 THSD4Q6ZMP0 1018 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 TMPRSS11FQ6ZWK6 438 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 CBLL1Q75N03 491 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 VTCN1Q7Z7D3 282 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 BPIFB2Q8N4F0 458 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 SEMA6DQ8NFY4 1073 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 HSH2DQ96JZ2 352 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 CCDC134Q9H6E4 229 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 G6PC2Q9NQR9 355 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 RHCGQ9UBD6 479 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 POLR1DQ9Y2S0 133 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 PPIAL4EA0A075B759 164 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 PPIAL4CA0A0B4J2A2 164 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 TEX13CA0A0J9YWL9 993 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 PRSS37A4D1T9 235 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 PPIAL4DF5H284 164 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 IFNL4K9M1U5 179 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 DEAF1O75398 565 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 SASH3O75995 380 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 UBOX5O94941 541 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 NDUFB2O95178 105 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 SERPINA1P01009 418 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 PPIAL4FP0DN26 164 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 COX4I1P13073 169 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 FPR2P25090 351 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 GPR4P46093 362 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 KRR1Q13601 381 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 ENDOGQ14249 297 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 KRT72Q14CN4 511 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 RBMS3Q6XE24 437 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 HACD2Q6Y1H2 254 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 SLC15A3Q8IY34 581 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 KLHL36Q8N4N3 616 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 POU5F2Q8N7G0 328 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 LRRC75AQ8NAA5 344 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 OR5L1Q8NGL2 311 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 KCTD14Q9BQ13 255 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 CMTM6Q9NX76 183 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 PLEK2Q9NYT0 353 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 UBAP1Q9NZ09 502 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 ARMCX1Q9P291 453 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 AURKCQ9UQB9 309 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 ENPP4Q9Y6X5 453 aa12.26□□□□□ -0.45
SMARCE1-209ENST00000478349 CUBNO60494 3623 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 LOC105371242A0A075B767 164 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 A0A087WUU8 490 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 A0A1W2PRQ8 180 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 KHDRBS3O75525 346 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 VENTXO95231 258 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 H1F0P07305 194 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 SDHAP31040 664 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 NUDT2P50583 147 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 RPS6KA3P51812 740 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 LSM6P62312 80 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 GUCY1A3Q02108 690 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 SF3A3Q12874 501 aaKnown RBP eCLIP12.25□□□□□ -0.455e-6■■■■■ 39.5
SMARCE1-209ENST00000478349 DGCR6Q14129 220 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 FGD3Q5JSP0 725 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 CGB2Q6NT52 195 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 SLC27A4Q6P1M0 643 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 GLB1L2Q8IW92 636 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 MUC20Q8N307 709 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 CLDN22Q8N7P3 220 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 FAM216AQ8WUB2 273 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 GTF3AQ92664 365 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 GCDHQ92947 438 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 CMTM5Q96DZ9 223 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 SAMD8Q96LT4 415 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 DCLRE1CQ96SD1 692 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 C7orf69Q9H7B7 122 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 NMNAT1Q9HAN9 279 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 NTN4Q9HB63 628 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 SAMD4AQ9UPU9 718 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 ADAM18Q9Y3Q7 739 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 NPTNQ9Y639 398 aa12.25□□□□□ -0.45
SMARCE1-209ENST00000478349 OR6C6A6NF89 314 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 H7C1C5 153 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 J3KTA2 159 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 FFAR1O14842 300 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 NGFP01138 241 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 KITLGP21583 273 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 CPT2P23786 658 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 CRABP1P29762 137 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 GSK3BP49841 420 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 SMIM11AP58511 58 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 LCN6P62502 163 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 CDK5R2Q13319 367 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 TMEM155Q4W5P6 130 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 MESTQ5EB52 335 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 OR2Z1Q8NG97 314 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms