RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 AP1B1Q10567 949 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 GANABQ14697 944 aaKnown RBP0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 DPYSL2Q16555 572 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 USH1GQ495M9 461 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 YIF1BQ5BJH7 314 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 ZNF660Q6AZW8 331 aaPredicted RBP0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 TMPPEQ6ZT21 453 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 DHDDSQ86SQ9 333 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 ACTL9Q8TC94 416 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 OSTF1Q92882 214 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 MRGPRFQ96AM1 343 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 ARGLU1Q9NWB6 273 aaPredicted RBP0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 ST3GAL6Q9Y274 331 aa0.19□□□□□ -2.38
NCKAP1-204ENST00000477988 COL6A6A6NMZ7 2263 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 DYSFO75923 2080 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 EIF1BO60739 113 aaKnown RBP0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 RAMP3O60896 148 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 RDH16O75452 317 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 SLC22A5O76082 557 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 CD1CP29017 333 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 EIF1P41567 113 aaKnown RBP0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 CCNA1P78396 465 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 CLINT1Q14677 625 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 FAM131AQ6UXB0 335 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 LRRC29Q8WV35 223 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 OTUB2Q96DC9 234 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 GCOM2Q9BZD3 368 aaPredicted RBP0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 LRRN3Q9H3W5 708 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 ZNF442Q9H7R0 627 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 CTNNA3Q9UI47 895 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 POLDIP2Q9Y2S7 368 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 VWA8A3KMH1 1905 aa0.18□□□□□ -2.38
NCKAP1-204ENST00000477988 KIAA1671Q9BY89 1806 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 CDHR2Q9BYE9 1310 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 RPRD2Q5VT52 1461 aaKnown RBP0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 IGHV3-72A0A0B4J1Y9 119 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 CCL21O00585 134 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 OR7A10O76100 309 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 ERLIN2O94905 339 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 SCELO95171 688 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 CRYGBP07316 175 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 CR1P17927 2039 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 LAP3P28838 519 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 FDFT1P37268 417 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 HCAR3P49019 387 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 DEGS2Q6QHC5 323 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 RBM43Q6ZSC3 357 aaKnown RBP0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 EGFL6Q8IUX8 553 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 RNASE11Q8TAA1 199 aaKnown RBP0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 EMG1Q92979 244 aaKnown RBP0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 MRPL38Q96DV4 380 aaKnown RBP0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 TRIM44Q96DX7 344 aaPredicted RBP0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 PIK3IP1Q96FE7 263 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 CNDP1Q96KN2 507 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 UFSP2Q9NUQ7 469 aa0.17□□□□□ -2.38
NCKAP1-204ENST00000477988 TRIM64A6NGJ6 449 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 TRIM64BA6NI03 449 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 CLDN34H7C241 214 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 PRRG1O14668 218 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 PLIN3O60664 434 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 DPM1O60762 260 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 IGHV3-11P01762 117 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 ANGP03950 147 aaKnown RBP0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 FGF1P05230 155 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 OR5H8P0DN80 308 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 CALCBP10092 127 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 THRAP10827 490 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 CCNB1P14635 433 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 CA8P35219 290 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 OPRD1P41143 372 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 C2orf54Q08AI8 447 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 ARHGAP19Q14CB8 494 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 KLHL38Q2WGJ6 581 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 TCEAL5Q5H9L2 206 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 AVPI1Q5T686 147 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 ZNF470Q6ECI4 717 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 APOBEC3HQ6NTF7 200 aaKnown RBP0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 CENPLQ8N0S6 344 aaPredicted RBP0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 ZNF567Q8N184 647 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 GTPBP8Q8N3Z3 284 aaPredicted RBP0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 OR10R2Q8NGX6 335 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 TCEAL3Q969E4 200 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 OMDQ99983 421 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 KCTD14Q9BQ13 255 aaPredicted RBP0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 ABCG5Q9H222 651 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 RHBDL2Q9NX52 303 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 RPH3ALQ9UNE2 315 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 MFHAS1Q9Y4C4 1052 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 COL4A1P02462 1669 aa0.16□□□□□ -2.38
NCKAP1-204ENST00000477988 KRBOX1C9JBD0 128 aa0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 C15orf65H3BRN8 121 aa0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 GLSO94925 669 aaPredicted RBP0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 CPSF4O95639 269 aaKnown RBP0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 PAHP00439 452 aa0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 HSMCR30P0CW71 290 aa0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 PAX7P23759 505 aa0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 P2RX1P51575 399 aa0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 KLF3P57682 345 aaPredicted RBP0.15□□□□□ -2.39
NCKAP1-204ENST00000477988 ACTG2P63267 376 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms