RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 D6RAR5 112 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 SNAPC5O75971 98 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 CSF1P09603 554 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 GABRA1P14867 456 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 FAUP35544 74 aaKnown RBP10.91□□□□□ -0.66
PTPRF-212ENST00000477970 POU3F1Q03052 451 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-212ENST00000477970 IKZF1Q13422 519 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 EXT1Q16394 746 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 KCNMB1Q16558 191 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ST3GAL2Q16842 350 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 C1orf100Q5SVJ3 147 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF767PQ75MW2 155 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 C9orf62Q8N4C0 152 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 OR10G3Q8NGC4 313 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 OR6M1Q8NGM8 313 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 M1APQ8TC57 530 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 FOXRED1Q96CU9 486 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ULBP3Q9BZM4 244 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 GAREM1Q9H706 876 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 METTL7AQ9H8H3 244 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 ZFP64Q9NPA5 681 aa10.91□□□□□ -0.66
PTPRF-212ENST00000477970 TP53I11O14683 189 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 LDLRAD4O15165 306 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 GMDSO60547 372 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 OR2J2O76002 312 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 ITGA5P08648 1049 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 MYBPHQ13203 477 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 OR5M10Q6IEU7 315 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 OR7E24Q6IFN5 339 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 FAM3DQ96BQ1 224 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 SMAD5Q99717 465 aaKnown RBP10.9□□□□□ -0.66
PTPRF-212ENST00000477970 MOB1AQ9H8S9 216 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 OCIAD1Q9NX40 245 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 CYB5R1Q9UHQ9 305 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 OR52A1Q9UKL2 312 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 CHCHD2Q9Y6H1 151 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-212ENST00000477970 CACNA1EQ15878 2313 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 OTOGLQ3ZCN5 2332 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 COL27A1Q8IZC6 1860 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-212ENST00000477970 IGHV1-45A0A0A0MS14 117 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 NDUFB6O95139 128 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 CER1O95813 267 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 MC2RQ01718 297 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 HIST3H3Q16695 136 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 RNASE12Q5GAN4 147 aaKnown RBP10.9□□□□□ -0.66
PTPRF-212ENST00000477970 DCXRQ7Z4W1 244 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 CDH26Q8IXH8 852 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 SLC7A5P1Q8MH63 180 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 SPICQ8N5J4 248 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 NOXO1Q8NFA2 376 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 THAP3Q8WTV1 239 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-212ENST00000477970 GPR137Q96N19 417 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 RBP7Q96R05 134 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 DEFB126Q9BYW3 111 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-212ENST00000477970 VDAC3Q9Y277 283 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 WDFY4Q6ZS81 3184 aa10.9□□□□□ -0.66
PTPRF-212ENST00000477970 SNRPGP15A8MWD9 76 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 WNT11O96014 354 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 MELTFP08582 738 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 POU3F4P49335 361 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 FAM69BQ5VUD6 431 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 SERPINA12Q8IW75 414 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 WDFY1Q8IWB7 410 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 OR6X1Q8NH79 312 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 RADILQ96JH8 1075 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 IMMP1LQ96LU5 166 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 SCPEP1Q9HB40 452 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 APMAPQ9HDC9 416 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 FAM206AQ9NX38 181 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 KLK11Q9UBX7 282 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 RHBDD3Q9Y3P4 386 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 C2orf72A6NCS6 295 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 H0YC42 278 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 FABP7O15540 132 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 DOK2O60496 412 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 ICMTO60725 284 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 PGA4P0DJD7 388 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 PGA3P0DJD8 388 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 RAB6AP20340 208 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 LAP3P28838 519 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 SPEM2Q0P670 501 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 C2orf76Q3KRA6 126 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 TMEM255AQ5JRV8 349 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 FAM198BQ6UWH4 519 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 GLDNQ6ZMI3 551 aaPredicted RBP10.89□□□□□ -0.67
PTPRF-212ENST00000477970 LUZP2Q86TE4 346 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 UEVLDQ8IX04 471 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 OR1J4Q8NGS1 313 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 C5orf34Q96MH7 638 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 SH2D2AQ9NP31 389 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 GPN3Q9UHW5 284 aaPredicted RBP10.89□□□□□ -0.67
PTPRF-212ENST00000477970 BOLA1Q9Y3E2 137 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 RBBP9O75884 186 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 MPZL1O95297 269 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 FMODQ06828 376 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 WDSUB1Q8N9V3 476 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 DNAJA3Q96EY1 480 aa10.89□□□□□ -0.67
PTPRF-212ENST00000477970 SLC25A44Q96H78 314 aaPredicted RBP10.89□□□□□ -0.67
PTPRF-212ENST00000477970 OXGR1Q96P68 337 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms