RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CYSLTR2Q9NS75 346 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 LAMP5Q9UJQ1 280 aa10.68□□□□□ -0.7
PRPF39-203ENST00000477626 AHCTF1Q8WYP5 2266 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 TRBV2A0A0J9YWF9 115 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 TTRP02766 147 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 SPINK2P20155 84 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 STEAP3Q658P3 488 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 DCXRQ7Z4W1 244 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 FAM109AQ8N4B1 249 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 SNRNP27Q8WVK2 155 aaKnown RBP10.67□□□□□ -0.7
PRPF39-203ENST00000477626 CPNE4Q96A23 557 aaPredicted RBP10.67□□□□□ -0.7
PRPF39-203ENST00000477626 SLC25A38Q96DW6 304 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 CMTM3Q96MX0 182 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 ELOVL3Q9HB03 270 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 CLCF1Q9UBD9 225 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 KLF13Q9Y2Y9 288 aaPredicted RBP10.67□□□□□ -0.7
PRPF39-203ENST00000477626 OR6C6A6NF89 314 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 QDPRP09417 244 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 SRMP19623 302 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 ITGA3P26006 1051 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 FAM27BQ5VT28 67 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 HDDC2Q7Z4H3 204 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 CEACAM19Q7Z692 300 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 LYZL4Q96KX0 146 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 KCNS3Q9BQ31 491 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 SLC6A15Q9H2J7 730 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 KCNN2Q9H2S1 579 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 NOX4Q9NPH5 578 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 CMAHPQ9Y471 501 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 SYNGR3O43761 229 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 MRPS34P82930 218 aaKnown RBP10.67□□□□□ -0.7
PRPF39-203ENST00000477626 TNK1Q13470 666 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 BAK1Q16611 211 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF324BQ6AW86 544 aaPredicted RBP10.67□□□□□ -0.7
PRPF39-203ENST00000477626 TRIM63Q969Q1 353 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 SLC17A5Q9NRA2 495 aa10.67□□□□□ -0.7
PRPF39-203ENST00000477626 GDF2Q9UK05 429 aaPredicted RBP10.67□□□□□ -0.7
PRPF39-203ENST00000477626 ANKRD11Q6UB99 2663 aaPredicted RBP10.66□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF503-AS2A6NEH8 195 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 ACTL6AO96019 429 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 RAF1P04049 648 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 MNDAP41218 407 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 RRADP55042 308 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 CLDN17P56750 224 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 RASGEF1BQ0VAM2 473 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 EIF2B1Q14232 305 aaKnown RBP10.66□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF181Q2M3W8 571 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 Q499Y3 187 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 LINC00696Q6ZRV3 163 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 ELMOD2Q8IZ81 293 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 GPR137CQ8N3F9 429 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 SNX33Q8WV41 574 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 HMG20AQ9NP66 347 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 TCEA1P23193 301 aaKnown RBP10.66□□□□□ -0.7
PRPF39-203ENST00000477626 CALRP27797 417 aaKnown RBP10.66□□□□□ -0.7
PRPF39-203ENST00000477626 CARD18P57730 90 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 QRFPP83859 136 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 STAC2Q6ZMT1 411 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 GALNTL5Q7Z4T8 443 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.66□□□□□ -0.7
PRPF39-203ENST00000477626 IL22RA1Q8N6P7 574 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 ABHD3Q8WU67 409 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 ORAI1Q96D31 301 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 TAAR6Q96RI8 345 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 TEKT2Q9UIF3 430 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 FREM1Q5H8C1 2179 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 CNOT1A5YKK6 2376 aaKnown RBP10.66□□□□□ -0.7
PRPF39-203ENST00000477626 FAM47E-STBD1D6RA91 191 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 EIF4EP06730 217 aaKnown RBP10.66□□□□□ -0.7
PRPF39-203ENST00000477626 TACSTD2P09758 323 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF43P17038 809 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 GDF1P27539 372 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 RFX2P48378 723 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF766Q5HY98 468 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 CORO6Q6QEF8 472 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 SYT9Q86SS6 491 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 OR14L1PQ8NHC6 308 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 FGFBP3Q8TAT2 258 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 CCDC32Q9BV29 185 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 SLC22A13Q9Y226 551 aa10.66□□□□□ -0.7
PRPF39-203ENST00000477626 K7EM74 188 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 CXCL13O43927 109 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 DOK2O60496 412 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 LMX1BO60663 402 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 OR6A2O95222 327 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 SERPINA3P01011 423 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 ELK1P19419 428 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 NPR2P20594 1047 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 DNM1P34Q6PK57 102 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 METAP1DQ6UB28 335 aaPredicted RBP10.65□□□□□ -0.7
PRPF39-203ENST00000477626 PLXDC2Q6UX71 529 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 LINC00346Q8IVM7 164 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 OR5H6Q8NGV6 325 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 OR5AK2Q8NH90 309 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 CHAC2Q8WUX2 184 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 SLAMF6Q96DU3 332 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 NAA11Q9BSU3 229 aaPredicted RBP10.65□□□□□ -0.7
PRPF39-203ENST00000477626 ZNF416Q9BWM5 594 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 TMEM38BQ9NVV0 291 aa10.65□□□□□ -0.7
PRPF39-203ENST00000477626 ATP6V1E1P36543 226 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms