RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 FRG2BQ96QU4 278 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 OR8D2Q9GZM6 311 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 CHST8Q9H2A9 424 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 FBRSQ9HAH7 460 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 KCNE1BA0A087WTH5 132 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 A0A1B0GTI1 187 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 A0A1W2PPE2 198 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 MGAT4DA6NG13 374 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 GPR89AB7ZAQ6 455 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 XRCC3O43542 346 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 PMS2P2O95744 297 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 ERCC1P07992 297 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 GPR89BP0CG08 455 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 PRPH2P23942 346 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 ITPKBP27987 946 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 PSMB6P28072 239 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 DRD3P35462 400 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 WASP42768 502 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 NOVA1P51513 510 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 CEBPGP53567 150 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 RPS23P62266 143 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 ZXDCQ2QGD7 858 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF658BQ4V348 819 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 PDZD11Q5EBL8 140 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 COL5A1-AS1Q5SY13 56 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 AGBL4Q5VU57 503 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 OR2T2Q6IF00 324 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 TCTN3Q6NUS6 607 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 BCDIN3DQ7Z5W3 292 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 LRRC56Q8IYG6 542 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 AGBL5Q8NDL9 886 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 OR52I2Q8NH67 350 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 COX14Q96I36 57 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 STACQ99469 402 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF350Q9GZX5 532 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 PCBD2Q9H0N5 130 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 TVP23BQ9NYZ1 205 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 MRPL15Q9P015 296 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 GSKIPQ9P0R6 139 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 OR52A1Q9UKL2 312 aa11.47□□□□□ -0.57
RTFDC1-207ENST00000477573 IGLON5A6NGN9 336 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 OR1F1O43749 312 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 OR2J2O76002 312 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 C1orf105O95561 183 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 SLC16A8O95907 504 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 IL3P08700 152 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 IGFBP1P08833 259 aaPredicted RBP11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 HLA-GP17693 338 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 TLX1P31314 330 aaPredicted RBP11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 AFF3P51826 1226 aaKnown RBP11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 PTTG1IPP53801 180 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 CLDN12P56749 244 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 PRPS1P60891 318 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 CKAP5Q14008 2032 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 AGERQ15109 404 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 IQCJQ1A5X6 159 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 KHDRBS2Q5VWX1 349 aaKnown RBP11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 LILRA3Q8N6C8 439 aaPredicted RBP11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 OR4K5Q8NGD3 323 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 OR6N1Q8NGY5 312 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 OR2V1Q8NHB1 315 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 GPR148Q8TDV2 347 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 ADAMTS17Q8TE56 1095 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 MUCL1Q96DR8 90 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 PANX1Q96RD7 426 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 TRPM6Q9BX84 2022 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 C1orf198Q9H425 327 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 CLDND1Q9NY35 253 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 FOXJ2Q9P0K8 574 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 RNF24Q9Y225 148 aa11.46□□□□□ -0.57
RTFDC1-207ENST00000477573 PCCBP05166 539 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 NBEAP1P0C6P0 100 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 IMPA1P29218 277 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 NTSR1P30989 418 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 KIR3DL1P43629 444 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 CAPZBP47756 277 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 PNLIPRP1P54315 467 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 MRPL49Q13405 166 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 GUK1Q16774 197 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 AWAT2Q6E213 333 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 BTNL8Q6UX41 500 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 NUFIP2Q7Z417 695 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 AMZ2Q86W34 360 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 TMEM183AQ8IXX5 376 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 HORMAD2Q8N7B1 307 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 SLC35G3Q8N808 338 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 OR4S1Q8NGB4 309 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ORAOV1Q8WV07 137 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ASB17Q8WXJ9 295 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ALKBH7Q9BT30 221 aaPredicted RBP11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 RPP25Q9BUL9 199 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 POLR2J3Q9H1A7 115 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ADAP2Q9NPF8 381 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 PARP11Q9NR21 331 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 GULP1Q9UBP9 304 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ICKQ9UPZ9 632 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 TMEM235A6NFC5 223 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 C9JQL5 133 aa11.45□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF432O94892 652 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms