RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 NGFRP08138 427 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 QDPRP09417 244 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 CD79AP11912 226 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 FCGR2AP12318 317 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 S100GP29377 79 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 RAP2BP61225 183 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 TCEAL6Q6IPX3 200 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 C3orf33Q6P1S2 294 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 GSG1LQ6UXU4 331 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 C17orf107Q6ZR85 190 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 LINC00696Q6ZRV3 163 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 SMIM4Q8WVI0 70 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 DCUN1D4Q92564 292 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 HAVCR1Q96D42 359 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 SLAMF6Q96DU3 332 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 BORCS8Q96FH0 119 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 TSPAN32Q96QS1 320 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 STRADBQ9C0K7 418 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 TXNIPQ9H3M7 391 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 MRPS28Q9Y2Q9 187 aaKnown RBP9.96□□□□□ -0.82
COL27A1-204ENST00000477421 SHISA3A0PJX4 238 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 GMDSO60547 372 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 HOXC4P09017 264 aaPredicted RBP9.96□□□□□ -0.82
COL27A1-204ENST00000477421 BLVRBP30043 206 aaPredicted RBP9.96□□□□□ -0.82
COL27A1-204ENST00000477421 DLSTP36957 453 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 ARHGDIBP52566 201 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 PNLIPRP2P54317 469 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 BTG1P62324 171 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 SMAD4Q13485 552 aaKnown RBP9.96□□□□□ -0.82
COL27A1-204ENST00000477421 EBPQ15125 230 aaKnown RBP9.96□□□□□ -0.82
COL27A1-204ENST00000477421 FAM189A2Q15884 450 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 BCL2A1Q16548 175 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 TMEM95Q3KNT9 176 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 DMKNQ6E0U4 476 aaPredicted RBP9.96□□□□□ -0.82
COL27A1-204ENST00000477421 RPS19BP1Q86WX3 136 aaKnown RBP9.96□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF100Q8IYN0 542 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 OR4S1Q8NGB4 309 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 OR10G3Q8NGC4 313 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 PHYHIPQ92561 330 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 TM4SF19Q96DZ7 209 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 GNRHR2Q96P88 292 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 SMOC1Q9H4F8 434 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 PCDHGA1Q9Y5H4 931 aa9.96□□□□□ -0.82
COL27A1-204ENST00000477421 BDP1A6H8Y1 2624 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 BRCA2P51587 3418 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 A0A0A6YYH2 397 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 A6NJ64 397 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 HSPB6O14558 160 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 RAD51DO75771 328 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 CCL7P80098 99 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 PLP2Q04941 152 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 HACD4Q5VWC8 232 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 CD276Q5ZPR3 534 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 GLIPR1L1Q6UWM5 242 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 PRR18Q8N4B5 295 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF565Q8N9K5 539 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 ZFAND1Q8TCF1 268 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 C17orf50Q8WW18 174 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 PIGCQ92535 297 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 RAB3CQ96E17 227 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 MVB12AQ96EY5 273 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 SMIM3Q9BZL3 60 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF700Q9H0M5 742 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 EHFQ9NZC4 300 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 COL4A6Q14031 1691 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 MTRF1O75570 445 aaKnown RBP9.95□□□□□ -0.82
COL27A1-204ENST00000477421 POU2F2P09086 479 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 HOXC12P31275 282 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 NPY4RP50391 375 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF141Q15928 474 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 SPEM1Q8N4L4 309 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 OR6M1Q8NGM8 313 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 OTOSQ8NHW6 89 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 PTPMT1Q8WUK0 201 aaPredicted RBP9.95□□□□□ -0.82
COL27A1-204ENST00000477421 SPTSSAQ969W0 71 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF845Q96IR2 970 aaPredicted RBP9.95□□□□□ -0.82
COL27A1-204ENST00000477421 CHST11Q9NPF2 352 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 OR5V1Q9UGF6 321 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 GPR171O14626 319 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 MBTPS2O43462 519 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 TPPPO94811 219 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 SYNGR4O95473 234 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 IL9P15248 144 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 CXCL3P19876 107 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 FASLGP48023 281 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 NUBP1P53384 320 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 MTCP1P56278 107 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 SLC37A1P57057 533 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 OR4K15Q8NH41 348 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 CDC6Q99741 560 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 JAM3Q9BX67 310 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 MRM2Q9UI43 246 aaKnown RBP9.95□□□□□ -0.82
COL27A1-204ENST00000477421 NUP50Q9UKX7 468 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 KCNIP3Q9Y2W7 256 aa9.95□□□□□ -0.82
COL27A1-204ENST00000477421 LSM5Q9Y4Y9 91 aaKnown RBP9.95□□□□□ -0.82
COL27A1-204ENST00000477421 SDCBPO00560 298 aaPredicted RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF780AO75290 641 aaPredicted RBP9.94□□□□□ -0.82
COL27A1-204ENST00000477421 TRAPPC2P0DI81 140 aa9.94□□□□□ -0.82
COL27A1-204ENST00000477421 TRAPPC2BP0DI82 140 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms