RNA–Protein interactions for RNA: ENST00000477112.1

DDX17-208, Transcript of DEAD-box helicase 17, human

TSL 2

Gene DDX17, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX17-208	ENST00000477112	TNFSF11	O14788	317 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	PHYH	O14832	338 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	PSTPIP1	O43586	416 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	TPST2	O60704	377 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SLC19A2	O60779	497 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	FCN3	O75636	299 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	RP2	O75695	350 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	EIF3G	O75821	320 aa	Known RBP eCLIP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	SULT1C4	O75897	302 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	OR2J2	O76002	312 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	MPZL1	O95297	269 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CNIH1	O95406	144 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SYNGR4	O95473	234 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	TTC4	O95801	387 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	FAM107A	O95990	144 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	EGF	P01133	1207 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	IGF2	P01344	180 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	ATP1A1	P05023	1023 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	C2	P06681	752 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	OR8U9	P0C7N5	309 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	ARSB	P15848	533 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SPI1	P17947	270 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	NELFE	P18615	380 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	MAOA	P21397	527 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	MPZ	P25189	248 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CALML3	P27482	149 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	GABRR2	P28476	465 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	GNRHR	P30968	328 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	S100A7	P31151	101 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CA5A	P35218	305 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CSK	P41240	450 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CRYBB2	P43320	205 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	MAP2K4	P45985	399 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	RPL5	P46777	297 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	NUMB	P49757	651 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	VEGFC	P49767	419 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	RBP2	P50120	134 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	PPOX	P50336	477 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	ASCL1	P50553	236 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	TNFSF10	P50591	281 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	HLCS	P50747	726 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	EFNA3	P52797	238 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	NAPA	P54920	295 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	TMPRSS3	P57727	454 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	DNAJB13	P59910	316 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	ERVPABLB-1	P60509	514 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	RPL32	P62910	135 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	DLK1	P80370	383 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SLC7A9	P82251	487 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	GTF2B	Q00403	316 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	MLLT11	Q13015	90 aa	Predicted RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	SELENBP1	Q13228	472 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	NFATC2	Q13469	925 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	COL4A6	Q14031	1691 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	NFATC4	Q14934	902 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SF3A2	Q15428	464 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	TRAM1	Q15629	374 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CALCRL	Q16602	461 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	DGUOK	Q16854	277 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CTU2	Q2VPK5	515 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	RFX4	Q33E94	735 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SMIM21	Q3B7S5	101 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	TMEM176B	Q3YBM2	270 aa	Predicted RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	C14orf28	Q4W4Y0	310 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SFT2D3	Q587I9	215 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SIRPB2	Q5JXA9	342 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SAMD4B	Q5PRF9	694 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	LY6G6F	Q5SQ64	297 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	ZFYVE26	Q68DK2	2539 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	FAM71F2	Q6NXP2	309 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	MED27	Q6P2C8	311 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SCIMP	Q6UWF3	145 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	LCLAT1	Q6UWP7	414 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CEACAM20	Q6UY09	585 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	HACD2	Q6Y1H2	254 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	QSOX2	Q6ZRP7	698 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	C19orf35	Q6ZS72	473 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CFAP47	Q6ZTR5	3102 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	CENPU	Q71F23	418 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	H2BFWT	Q7Z2G1	175 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	NUFIP2	Q7Z417	695 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	NET1	Q7Z628	596 aa	Predicted RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	TMEM173	Q86WV6	379 aa	Predicted RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	MEX3D	Q86XN8	651 aa	Known RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	RAB43	Q86YS6	212 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	RIMKLA	Q8IXN7	391 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	KIR2DL5A	Q8N109	375 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	LGI3	Q8N145	548 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	SVOPL	Q8N434	492 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	EMC1	Q8N766	993 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	POC1A	Q8NBT0	407 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.55	□□□□□ -2
DDX17-208	ENST00000477112	NPEPL1	Q8NDH3	523 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	OR5L1	Q8NGL2	311 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	OR4D5	Q8NGN0	318 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	OR10Q1	Q8NGQ4	319 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	OR5H6	Q8NGV6	325 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	OR4K15	Q8NH41	348 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	OR52I2	Q8NH67	350 aa		2.55	□□□□□ -2
DDX17-208	ENST00000477112	KIR2DL5B	Q8NHK3	375 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms