RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 GCNT2Q8N0V5 402 aa25.39■■□□□ 1.65
VEGFA-211ENST00000476772 TEX19Q8NA77 164 aa25.39■■□□□ 1.65
VEGFA-211ENST00000476772 C9orf106Q8NAJ2 232 aa25.39■■□□□ 1.65
VEGFA-211ENST00000476772 RPS4Y2Q8TD47 263 aa25.39■■□□□ 1.65
VEGFA-211ENST00000476772 WNT2BQ93097 391 aa25.39■■□□□ 1.65
VEGFA-211ENST00000476772 FOXB1Q99853 325 aa25.39■■□□□ 1.65
VEGFA-211ENST00000476772 CENPMQ9NSP4 180 aa25.39■■□□□ 1.65
VEGFA-211ENST00000476772 TXNL4BQ9NX01 149 aaKnown RBP25.39■■□□□ 1.65
VEGFA-211ENST00000476772 TPOP07202 933 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 CD53P19397 219 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 NPR2P20594 1047 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 RIDAP52758 137 aaKnown RBP25.38■■□□□ 1.65
VEGFA-211ENST00000476772 ALDH16A1Q8IZ83 802 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 HAVCR2Q8TDQ0 301 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 GHSRQ92847 366 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 HDHD5Q9BXW7 423 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 UPB1Q9UBR1 384 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 SVILO95425 2214 aa25.38■■□□□ 1.65
VEGFA-211ENST00000476772 FREM1Q5H8C1 2179 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 RER1O15258 196 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 HLA-DPB1P04440 258 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 B4GALT1P15291 398 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 OPRL1P41146 370 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 INSL4Q14641 139 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 FAM27BQ5VT28 67 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 NSUN5P2Q63ZY6 315 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 KDF1Q8NAX2 398 aaPredicted RBP25.37■■□□□ 1.65
VEGFA-211ENST00000476772 SIAEQ9HAT2 523 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 PRSS50Q9UI38 385 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 ARHGAP21Q5T5U3 1957 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 GTF3C1Q12789 2109 aa25.37■■□□□ 1.65
VEGFA-211ENST00000476772 TRDV1A0A1B0GX56 115 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 ZNF587BE7ETH6 402 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 RPL36A-HNRNPH2H7BZ11 118 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 ALKBH1Q13686 389 aaKnown RBP25.36■■□□□ 1.65
VEGFA-211ENST00000476772 PRR30Q53SZ7 412 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-211ENST00000476772 C22orf42Q6IC83 251 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 SNRNP40Q96DI7 357 aaKnown RBP25.36■■□□□ 1.65
VEGFA-211ENST00000476772 PDCD1LG2Q9BQ51 273 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 DCSTAMPQ9H295 470 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 FRRS1LQ9P0K9 344 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 FBXL3Q9UKT7 428 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 CD8B2A6NJW9 211 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 GABRPO00591 440 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 ZNF254O75437 659 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 H2BFMP0C1H6 154 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 CD8BP10966 210 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 GUSBP1Q15486 140 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 DEGS2Q6QHC5 323 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 USP43Q70EL4 1123 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 CD163Q86VB7 1156 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 UBE2J2Q8N2K1 259 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 OR2G2Q8NGZ5 317 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 SH3GL3Q99963 347 aa25.36■■□□□ 1.65
VEGFA-211ENST00000476772 PIEZO2Q9H5I5 2752 aa25.35■■□□□ 1.65
VEGFA-211ENST00000476772 PRRC2CQ9Y520 2896 aaKnown RBP25.35■■□□□ 1.65
VEGFA-211ENST00000476772 RGS9O75916 674 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-211ENST00000476772 CD1AP06126 327 aa25.35■■□□□ 1.65
VEGFA-211ENST00000476772 TMEM91Q6ZNR0 172 aa25.35■■□□□ 1.65
VEGFA-211ENST00000476772 KBTBD8Q8NFY9 601 aa25.35■■□□□ 1.65
VEGFA-211ENST00000476772 FBXO17Q96EF6 278 aa25.35■■□□□ 1.65
VEGFA-211ENST00000476772 SLX1AQ9BQ83 275 aa25.35■■□□□ 1.65
VEGFA-211ENST00000476772 PNRC2Q9NPJ4 139 aaKnown RBP25.35■■□□□ 1.65
VEGFA-211ENST00000476772 NCOA6Q14686 2063 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-211ENST00000476772 ZNF878C9JN71 531 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 GABRA1P14867 456 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 UGT2B10P36537 528 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 OR3A2P47893 321 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 SERPINB10P48595 397 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 FOXG1P55316 489 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-211ENST00000476772 FAPQ12884 760 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 SF3B4Q15427 424 aaKnown RBP eCLIP25.34■■□□□ 1.652e-10■■■□□ 18.3
VEGFA-211ENST00000476772 TRAM1Q15629 374 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 STK11Q15831 433 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 C9orf135Q5VTT2 229 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 FAM214BQ7L5A3 538 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 HIST2H2ABQ8IUE6 130 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-211ENST00000476772 PRSS35Q8N3Z0 413 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 SLC22A24Q8N4F4 322 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 OR13C5Q8NGS8 318 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 DOCK7Q96N67 2140 aa25.34■■□□□ 1.65
VEGFA-211ENST00000476772 DVL2O14641 736 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 WDR1O75083 606 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 PNPP00491 289 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 FGF9P31371 208 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-211ENST00000476772 MFGE8Q08431 387 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-211ENST00000476772 RTL6Q6ICC9 239 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 FDX2Q6P4F2 183 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 KLHL24Q6TFL4 600 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 ZNF813Q6ZN06 617 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 ABHD4Q8TB40 342 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 FAM57AQ8TBR7 257 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 DYNC2LI1Q8TCX1 351 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 C4orf45Q96LM5 186 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 COQ7Q99807 217 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 ASF1BQ9NVP2 202 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 EMC9Q9Y3B6 208 aa25.33■■□□□ 1.65
VEGFA-211ENST00000476772 SRSF10O75494 262 aaKnown RBP25.32■■□□□ 1.64
VEGFA-211ENST00000476772 ZFPL1O95159 310 aa25.32■■□□□ 1.64
VEGFA-211ENST00000476772 CST2P09228 141 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms