RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 CACNG6Q9BXT2 260 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 RACGAP1Q9H0H5 632 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 KCNN2Q9H2S1 579 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 FAIMQ9NVQ4 179 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 TBCCD1Q9NVR7 557 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 MRPL22Q9NWU5 206 aaKnown RBP8.36□□□□□ -1.07
HDAC3-208ENST00000476739 ASH2LQ9UBL3 628 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 FZR1Q9UM11 496 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 TIMM10BQ9Y5J6 103 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 FKBP7Q9Y680 259 aa8.36□□□□□ -1.07
HDAC3-208ENST00000476739 IQCMA0A1B0GVH7 501 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 TVP23AA6NH52 213 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 FAM183AA6NL82 134 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 C12orf71A8MTZ7 269 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 G3V2T6 193 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 RER1O15258 196 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 ENTPD5O75356 428 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 IGHV4-39P01824 125 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 ZNF23P17027 643 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 CCNOP22674 350 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 STOMP27105 288 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 EPHA2P29317 976 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 CRABP1P29762 137 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 SERPINF1P36955 418 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 WNT5AP41221 380 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 RPS27P42677 84 aaKnown RBP8.35□□□□□ -1.07
HDAC3-208ENST00000476739 GUCA1AP43080 201 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-208ENST00000476739 ARHGDIAP52565 204 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 ATP5J2P56134 94 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 LSM6P62312 80 aaKnown RBP8.35□□□□□ -1.07
HDAC3-208ENST00000476739 CDK5Q00535 292 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 PLP2Q04941 152 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 GINS1Q14691 196 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 KCNMB1Q16558 191 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 TBC1D28Q2M2D7 210 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 TMEM154Q6P9G4 183 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 CORO6Q6QEF8 472 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 SYT9Q86SS6 491 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 LRP11Q86VZ4 500 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 LURAP1LQ8IV03 231 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 LINC00346Q8IVM7 164 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 ZNF101Q8IZC7 436 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 SVOPLQ8N434 492 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 ZBTB8BQ8NAP8 495 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-208ENST00000476739 SLC26A10Q8NG04 563 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 SLC7A6Q92536 515 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 BDH2Q9BUT1 245 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 MRPL37Q9BZE1 423 aaKnown RBP8.35□□□□□ -1.07
HDAC3-208ENST00000476739 NMNAT2Q9BZQ4 307 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 GRIP2Q9C0E4 1043 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 ZNF442Q9H7R0 627 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 DCLRE1BQ9H816 532 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 MED20Q9H944 212 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 ZNF556Q9HAH1 456 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 MYEF2Q9P2K5 600 aaKnown RBP8.35□□□□□ -1.07
HDAC3-208ENST00000476739 FBXL3Q9UKT7 428 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 BAIAP2Q9UQB8 552 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 LHFPL6Q9Y693 200 aa8.35□□□□□ -1.07
HDAC3-208ENST00000476739 C5orf49A4QMS7 147 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 SAC3D1A6NKF1 404 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 SGCEO43556 437 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 SYNGR3O43761 229 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 DOK2O60496 412 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 PFDN1O60925 122 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 LY6HO94772 140 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 SNAP29O95721 258 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 NGFP01138 241 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 SPI1P17947 270 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 GRK5P34947 590 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 APLNRP35414 380 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 GLRXP35754 106 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 GGT2P36268 569 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 VHLP40337 213 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 PCBD1P61457 104 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 GALK2Q01415 458 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 TEKQ02763 1124 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 AQP6Q13520 282 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 EFNB3Q15768 340 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 TMEM255AQ5JRV8 349 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 LINC01590Q5TEZ4 76 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 KDM4DQ6B0I6 523 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 SLC27A4Q6P1M0 643 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 DNM1P34Q6PK57 102 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 CFAP77Q6ZQR2 320 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 VASH1Q7L8A9 365 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-208ENST00000476739 HIPK1Q86Z02 1210 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 TGIF2LYQ8IUE0 185 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 ZCCHC24Q8N2G6 241 aaKnown RBP8.34□□□□□ -1.07
HDAC3-208ENST00000476739 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 ICA1LQ8NDH6 482 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 PTP4A1Q93096 173 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 MRPL24Q96A35 216 aaKnown RBP8.34□□□□□ -1.07
HDAC3-208ENST00000476739 DOK1Q99704 481 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 SYT3Q9BQG1 590 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 GABARAPL1Q9H0R8 117 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 PLK3Q9H4B4 646 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 WDR76Q9H967 626 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 CDH20Q9HBT6 801 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 CMC2Q9NRP2 79 aa8.34□□□□□ -1.07
HDAC3-208ENST00000476739 KIF17Q9P2E2 1029 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms