RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 OR5M10Q6IEU7 315 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 SLC25A25Q6KCM7 469 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 PAPD4Q6PIY7 484 aaKnown RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 ZNF704Q6ZNC4 412 aaPredicted RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 OR8H1Q8NGG4 311 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 KCNK17Q96T54 332 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 CHST11Q9NPF2 352 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 SDHAF3Q9NRP4 125 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 B3GALT5Q9Y2C3 310 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 ERVH48-1M5A8F1 160 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 SULT1C2O00338 296 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 CREBL2O60519 120 aaPredicted RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 ALDOBP05062 364 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 ACHEP22303 614 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 EMP2P54851 167 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 TLE3Q04726 772 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 MFGE8Q08431 387 aaPredicted RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 IKZF1Q13422 519 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 RBMS2Q15434 407 aaKnown RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 CLPPQ16740 277 aaPredicted RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 PCGF3Q3KNV8 242 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 TEX261Q6UWH6 196 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 C16orf47Q6ZP98 133 aaPredicted RBP14.72□□□□□ -0.05
TMEM53-208ENST00000476724 MEIOBQ8N635 442 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 ARL5BQ96KC2 179 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 MED11Q9P086 117 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 U3KQ87 197 aa14.72□□□□□ -0.05
TMEM53-208ENST00000476724 CIB4A0PJX0 185 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 H3BSH0 61 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 CDX4O14627 284 aaPredicted RBP14.71□□□□□ -0.05
TMEM53-208ENST00000476724 ZNF354AO60765 605 aaPredicted RBP14.71□□□□□ -0.05
TMEM53-208ENST00000476724 TSC22D2O75157 780 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 PRSS3P35030 304 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 CAPZA1P52907 286 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 HSF1Q00613 529 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 SLC25A53Q5H9E4 307 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 TMEM244Q5VVB8 128 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 ZNF626Q68DY1 528 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 Q6ZTK2 550 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 NLRC3Q7RTR2 1065 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 KDM8Q8N371 416 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 OR1J4Q8NGS1 313 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 OR2T35Q8NGX2 323 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 MRGPRX4Q96LA9 322 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 SORCS2Q96PQ0 1159 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 METTL17Q9H7H0 456 aaPredicted RBP14.71□□□□□ -0.05
TMEM53-208ENST00000476724 ALKBH4Q9NXW9 302 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 PISDQ9UG56 409 aa14.71□□□□□ -0.05
TMEM53-208ENST00000476724 TRAV18A0A075B6X5 111 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 TRBV11-1A0A0K0K1C0 115 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 CYC1P08574 325 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 IL11P20809 199 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 HTR2CP28335 458 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 RAD52P43351 418 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 PLA2G7Q13093 441 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 TRA2AQ13595 282 aaKnown RBP eCLIP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 FAM69BQ5VUD6 431 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 OTPQ5XKR4 325 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 ASPHD2Q6ICH7 369 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 AGBL5Q8NDL9 886 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 OR6M1Q8NGM8 313 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 ST7LQ8TDW4 575 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 THAP3Q8WTV1 239 aaPredicted RBP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 PPP1R14AQ96A00 147 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 SLC25A28Q96A46 364 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 SLC25A44Q96H78 314 aaPredicted RBP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 CMKLR1Q99788 373 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 PPP4R1LQ9P1A2 415 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 CACNA1CQ13936 2221 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 IGLV3-32A0A0A0MS00 114 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 A0A0A6YYH2 397 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 TMEM272A0A1B0GTI8 110 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 C2orf72A6NCS6 295 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 A6NJ64 397 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 LIPT2A6NK58 231 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 TMEM200CA6NKL6 621 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 MEN1O00255 615 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 ZFAND5O76080 213 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 MPZL1O95297 269 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 GP1BAP07359 652 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 AKAIN1P0CW23 69 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 SELENOPP49908 381 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 EFNB2P52799 333 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 CLDN6P56747 220 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 LGALSLQ3ZCW2 172 aaPredicted RBP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 CCDC157Q569K6 752 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 DCXRQ7Z4W1 244 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 CPEB2Q7Z5Q1 589 aaKnown RBP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 FOXRED1Q96CU9 486 aaPredicted RBP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 C5orf34Q96MH7 638 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 SPSB2Q99619 263 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 WDR77Q9BQA1 342 aaPredicted RBP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 IRF2BPLQ9H1B7 796 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 CLEC4MQ9H2X3 399 aaPredicted RBP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 G6PC2Q9NQR9 355 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 KLRF1Q9NZS2 232 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 OR52A1Q9UKL2 312 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 RPH3AQ9Y2J0 694 aaPredicted RBP14.7□□□□□ -0.06
TMEM53-208ENST00000476724 FREM3P0C091 2139 aa14.7□□□□□ -0.06
TMEM53-208ENST00000476724 A0A1W2PNV4 684 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms