RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 LSM3P62310 102 aaKnown RBP10.8□□□□□ -0.68
MRPL55-227ENST00000475832 TUBA1BP68363 451 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 ROR2Q01974 943 aaKnown RBP10.8□□□□□ -0.68
MRPL55-227ENST00000475832 RBPJQ06330 500 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 SLC3A1Q07837 685 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 CTF1Q16619 201 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 EIF2S3LQ2VIR3 472 aaKnown RBP10.8□□□□□ -0.68
MRPL55-227ENST00000475832 NRN1LQ496H8 165 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 PAMR1Q6UXH9 720 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 FOXL2NBQ6ZUU3 175 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 TUBA1AQ71U36 451 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 RHOUQ7L0Q8 258 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 ATCAYQ86WG3 371 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 WDFY1Q8IWB7 410 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 ZFP41Q8N8Y5 198 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 GJC3Q8NFK1 279 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 PELI1Q96FA3 418 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 TMED9Q9BVK6 235 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 COMMD4Q9H0A8 199 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 NIPAL2Q9H841 368 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 GPR35Q9HC97 309 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 EMC7Q9NPA0 242 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 CENPMQ9NSP4 180 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 ACOXLQ9NUZ1 547 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 CLCF1Q9UBD9 225 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 CYB5R1Q9UHQ9 305 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 MRM2Q9UI43 246 aaKnown RBP10.8□□□□□ -0.68
MRPL55-227ENST00000475832 ING1Q9UK53 422 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-227ENST00000475832 CLEC4AQ9UMR7 237 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 CNTRLQ7Z7A1 2325 aa10.8□□□□□ -0.68
MRPL55-227ENST00000475832 ITPR3Q14573 2671 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 TRDV1A0A1B0GX56 115 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 CD8B2A6NJW9 211 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 ZNF878C9JN71 531 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 PRRG2O14669 202 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 OGG1O15527 345 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 RGS9O75916 674 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-227ENST00000475832 RPP14O95059 124 aaKnown RBP10.79□□□□□ -0.68
MRPL55-227ENST00000475832 TGM6O95932 706 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 APOC1P02654 83 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 NR4A1P22736 598 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 HSD11B1P28845 292 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 AGTR1P30556 359 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 CDAP32320 146 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 PER3P56645 1201 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 VBP1P61758 197 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 AQP6Q13520 282 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 CDK5R1Q15078 307 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 CEACAM16Q2WEN9 425 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 ZNF829Q3KNS6 432 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-227ENST00000475832 ACSF3Q4G176 576 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-227ENST00000475832 ZNF684Q5T5D7 378 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 FAM27BQ5VT28 67 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 LIPNQ5VXI9 398 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 NSUN5P2Q63ZY6 315 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 LRRN1Q6UXK5 716 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 SLC16A12Q6ZSM3 486 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 ADGRE4PQ86SQ3 457 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 LINC00346Q8IVM7 164 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 RFLNBQ8N5W9 214 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 THRSPQ92748 146 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 TMEM203Q969S6 136 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 SLAMF6Q96DU3 332 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 SMIM19Q96E16 107 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 KCTD7Q96MP8 289 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 ALKBH3Q96Q83 286 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-227ENST00000475832 TSC22D3Q99576 134 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 FOXB1Q99853 325 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 OR51E2Q9H255 320 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 ELOVL3Q9HB03 270 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 TMEM38BQ9NVV0 291 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 SLCO1C1Q9NYB5 712 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 ASH2LQ9UBL3 628 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 KLHDC2Q9Y2U9 406 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 UGT2A1Q9Y4X1 527 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 NBASA2RRP1 2371 aa10.79□□□□□ -0.68
MRPL55-227ENST00000475832 CLEC18AA5D8T8 446 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 RPL36A-HNRNPH2H7BZ11 118 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 PSMD9O00233 223 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 ATE1O95260 518 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 LALBAP00709 142 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 CRHP06850 196 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 CST2P09228 141 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 DCTDP32321 178 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 SOX6P35712 828 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 UGT2B10P36537 528 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 PSMB10P40306 273 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 RPS27P42677 84 aaKnown RBP10.78□□□□□ -0.68
MRPL55-227ENST00000475832 GDI2P50395 445 aaKnown RBP10.78□□□□□ -0.68
MRPL55-227ENST00000475832 RPS25P62851 125 aaKnown RBP10.78□□□□□ -0.68
MRPL55-227ENST00000475832 GRB2P62993 217 aaKnown RBP10.78□□□□□ -0.68
MRPL55-227ENST00000475832 SCRN3Q0VDG4 424 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 ALKBH1Q13686 389 aaKnown RBP10.78□□□□□ -0.68
MRPL55-227ENST00000475832 DGUOKQ16854 277 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 PHYHD1Q5SRE7 291 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 C1orf185Q5T7R7 199 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 TSPO2Q5TGU0 170 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 DMKNQ6E0U4 476 aaPredicted RBP10.78□□□□□ -0.68
MRPL55-227ENST00000475832 CLEC18BQ6UXF7 455 aa10.78□□□□□ -0.68
MRPL55-227ENST00000475832 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms