RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TNFAIP8L3Q5GJ75 292 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 ARMC4Q5T2S8 1044 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 GPR157Q5UAW9 335 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 SLC27A4Q6P1M0 643 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 FIP1L1Q6UN15 594 aaKnown RBP10.56□□□□□ -0.72
SKA3-206ENST00000475251 SYT9Q86SS6 491 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 JAZF1Q86VZ6 243 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 OR10S1Q8NGN2 331 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 SLC26A7Q8TE54 656 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 ITLN1Q8WWA0 313 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 TAF15Q92804 592 aaKnown RBP eCLIP10.56□□□□□ -0.72
SKA3-206ENST00000475251 FAM71F1Q96KD3 344 aaPredicted RBP10.56□□□□□ -0.72
SKA3-206ENST00000475251 OR2V2Q96R30 315 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 WACQ9BTA9 647 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 ALG12Q9BV10 488 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 WNT5BQ9H1J7 359 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 CCDC167Q9P0B6 97 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 SLAMF8Q9P0V8 285 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 POMT1Q9Y6A1 747 aa10.56□□□□□ -0.72
SKA3-206ENST00000475251 TRBV5-3A0A0A0MS03 114 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 KIR2DS1A0A191URI9 304 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 MDFIC2A0A1B0GVS7 189 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 C12orf71A8MTZ7 269 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 M0QX08 132 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 OR7A10O76100 309 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 LYPD3O95274 346 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 FSTL3O95633 263 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 OPN1SWP03999 348 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 THY1P04216 161 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 COX5BP10606 129 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 LAP3P28838 519 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 AQP2P41181 271 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 MMP16P51512 607 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 WDR4P57081 412 aaKnown RBP10.55□□□□□ -0.72
SKA3-206ENST00000475251 PAX2Q02962 417 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 CYP51A1Q16850 503 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 DEFB112Q30KQ8 113 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 PAGE3Q5JUK9 113 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 WDR93Q6P2C0 686 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 SLC25A47Q6Q0C1 308 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 Q6YL49 198 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 MAVSQ7Z434 540 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 PATL1Q86TB9 770 aaKnown RBP10.55□□□□□ -0.72
SKA3-206ENST00000475251 PTOV1Q86YD1 416 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 KLBQ86Z14 1044 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 POU5F2Q8N7G0 328 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 OR8B3Q8NGG8 313 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 HDAC2Q92769 488 aaKnown RBP10.55□□□□□ -0.72
SKA3-206ENST00000475251 NMD3Q96D46 503 aaKnown RBP10.55□□□□□ -0.72
SKA3-206ENST00000475251 SGTBQ96EQ0 304 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 NEIL1Q96FI4 390 aaPredicted RBP10.55□□□□□ -0.72
SKA3-206ENST00000475251 OR8B2Q96RD0 313 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 RBM4BQ9BQ04 359 aaKnown RBP10.55□□□□□ -0.72
SKA3-206ENST00000475251 IKZF5Q9H5V7 419 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 MEPEQ9NQ76 525 aaPredicted RBP10.55□□□□□ -0.72
SKA3-206ENST00000475251 C1RLQ9NZP8 487 aa10.55□□□□□ -0.72
SKA3-206ENST00000475251 TMEM120BA0PK00 339 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 LRRC30A6NM36 301 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 SLC18A1P54219 525 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 PRKDCP78527 4128 aaKnown RBP10.54□□□□□ -0.72
SKA3-206ENST00000475251 GUCY1A3Q02108 690 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 FMODQ06828 376 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 SRSF4Q08170 494 aaKnown RBP10.54□□□□□ -0.72
SKA3-206ENST00000475251 SCRN3Q0VDG4 424 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 HLXQ14774 488 aaPredicted RBP10.54□□□□□ -0.72
SKA3-206ENST00000475251 TAF9Q16594 264 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 INTS11Q5TA45 600 aaKnown RBP10.54□□□□□ -0.72
SKA3-206ENST00000475251 ZNF774Q6NX45 483 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 EPGNQ6UW88 154 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 FUNDC1Q8IVP5 155 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 C1orf87Q8N0U7 546 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 GPR32P1Q8NGA4 272 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 LIPHQ8WWY8 451 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 DYRK2Q92630 601 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 PRSS27Q9BQR3 290 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 CPPED1Q9BRF8 314 aaPredicted RBP10.54□□□□□ -0.72
SKA3-206ENST00000475251 NUDT16L1Q9BRJ7 211 aaKnown RBP10.54□□□□□ -0.72
SKA3-206ENST00000475251 POLR2J2Q9GZM3 115 aaKnown RBP10.54□□□□□ -0.72
SKA3-206ENST00000475251 POLR2J3Q9H1A7 115 aaKnown RBP10.54□□□□□ -0.72
SKA3-206ENST00000475251 TXNIPQ9H3M7 391 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 NKIRAS1Q9NYS0 192 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 RNF114Q9Y508 228 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 USH1CQ9Y6N9 552 aa10.54□□□□□ -0.72
SKA3-206ENST00000475251 IGKV1D-43A0A0B4J1Z2 117 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 A0A1W2PPL8 197 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 HTR3EA5X5Y0 456 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 SLC22A31A6NKX4 558 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 J3QW42 95 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 TSPAN19P0C672 248 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 MSR1P21757 451 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 PITPNBP48739 271 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 SRP9P49458 86 aaKnown RBP10.53□□□□□ -0.72
SKA3-206ENST00000475251 TAS2R41P59536 307 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 ALG10Q5BKT4 473 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 BRD3OSQ6XYD6 125 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 ZNF620Q6ZNG0 422 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 Q6ZR03 302 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 FOXL2NBQ6ZUU3 175 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 RHOUQ7L0Q8 258 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms