RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SUMF1Q8NBK3 374 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 OR14L1PQ8NHC6 308 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ADAMTS17Q8TE56 1095 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 PSMF1Q92530 271 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 THOC3Q96J01 351 aaKnown RBP19.35■□□□□ 0.69
CCM2-206ENST00000474617 NEDD4LQ96PU5 975 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 FAM173AQ9BQD7 235 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 MARVELD1Q9BSK0 173 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 ANKRD10Q9NXR5 420 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 STMN3Q9NZ72 180 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 GTF2A1LQ9UNN4 478 aa19.35■□□□□ 0.69
CCM2-206ENST00000474617 GABARAPH6UMI1 98 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 SLC17A2O00624 439 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 QDPRP09417 244 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 FREM3P0C091 2139 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 FAM157BP0CG42 384 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 ADRA2CP18825 462 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 SLC6A1P30531 599 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 KIR2DL3P43628 341 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 CLDN17P56750 224 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 CLDN20P56880 219 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 PSMA6P60900 246 aaKnown RBP19.34■□□□□ 0.69
CCM2-206ENST00000474617 BTG1P62324 171 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 GRB2P62993 217 aaKnown RBP19.34■□□□□ 0.69
CCM2-206ENST00000474617 GABREP78334 506 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 MFGE8Q08431 387 aaPredicted RBP19.34■□□□□ 0.69
CCM2-206ENST00000474617 TRIP6Q15654 476 aaKnown RBP19.34■□□□□ 0.69
CCM2-206ENST00000474617 ELMOD2Q8IZ81 293 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 CMTM4Q8IZR5 234 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 TOMM5Q8N4H5 51 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 OR9K2Q8NGE7 335 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 OR5V1Q9UGF6 321 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 GDF2Q9UK05 429 aaPredicted RBP19.34■□□□□ 0.69
CCM2-206ENST00000474617 CACNG2Q9Y698 323 aa19.34■□□□□ 0.69
CCM2-206ENST00000474617 A0A1B0GTH9 108 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 LINC00854A0A1B0GVQ3 168 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 HMX3A6NHT5 357 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 SSX4O60224 188 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 IGFBP3P17936 291 aaPredicted RBP19.33■□□□□ 0.68
CCM2-206ENST00000474617 TCEA1P23193 301 aaKnown RBP19.33■□□□□ 0.68
CCM2-206ENST00000474617 FOXK1P85037 733 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 LRFN4Q6PJG9 635 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 FCRLAQ7L513 359 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 YIPF5Q969M3 257 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 UTP23Q9BRU9 249 aaKnown RBP19.33■□□□□ 0.68
CCM2-206ENST00000474617 FAM206AQ9NX38 181 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 NUFIP1Q9UHK0 495 aaKnown RBP19.33■□□□□ 0.68
CCM2-206ENST00000474617 SLC22A13Q9Y226 551 aa19.33■□□□□ 0.68
CCM2-206ENST00000474617 TRAV8-7A0A075B6U6 113 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 LOC107986453A0A1B0GWG9 222 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 A0A1W2PNU3 283 aaPredicted RBP19.32■□□□□ 0.68
CCM2-206ENST00000474617 NAP1L6A6NFF2 107 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 LRRC3CA6NJW4 275 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 ZNF814B7Z6K7 855 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 EEF1E1O43324 174 aaKnown RBP19.32■□□□□ 0.68
CCM2-206ENST00000474617 TNFSF15O95150 251 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 APOC1P02654 83 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 GSTT2BP0CG30 244 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 ENPP1P22413 925 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 CTSSP25774 331 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 DNASE1L1P49184 302 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 EIF2B2P49770 351 aaKnown RBP19.32■□□□□ 0.68
CCM2-206ENST00000474617 OC90Q02509 493 aaPredicted RBP19.32■□□□□ 0.68
CCM2-206ENST00000474617 RAB11BQ15907 218 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 DCAF10Q5QP82 559 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 DHRS13Q6UX07 377 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 LINC00346Q8IVM7 164 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 CCDC54Q8NEL0 328 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 OR51A4Q8NGJ6 313 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 OR13C3Q8NGS6 347 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 OR6N1Q8NGY5 312 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 SLC25A38Q96DW6 304 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 OR2M2Q96R28 347 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 NELFAQ9H3P2 528 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 SEC61A2Q9H9S3 476 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 CENPMQ9NSP4 180 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 LRFN1Q9P244 771 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 LHFPL6Q9Y693 200 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 SDK2Q58EX2 2172 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 ALPK2Q86TB3 2170 aa19.32■□□□□ 0.68
CCM2-206ENST00000474617 MSR1P21757 451 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 HSD11B1P28845 292 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 ZNF84P51523 738 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 RAG2P55895 527 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 TPTEP56180 551 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 RSBN1Q5VWQ0 802 aaPredicted RBP19.31■□□□□ 0.68
CCM2-206ENST00000474617 B3GNTL1Q67FW5 361 aaPredicted RBP19.31■□□□□ 0.68
CCM2-206ENST00000474617 SPATC1Q76KD6 591 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 WDFY1Q8IWB7 410 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 TMEM123Q8N131 208 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 OR6M1Q8NGM8 313 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 OR10AC1Q8NH08 325 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 SYNPRQ8TBG9 265 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 PTX4Q96A99 478 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 SFXN2Q96NB2 322 aa19.31■□□□□ 0.68
CCM2-206ENST00000474617 A0A0A6YYH2 397 aa19.3■□□□□ 0.68
CCM2-206ENST00000474617 A0A0J9YW62 118 aa19.3■□□□□ 0.68
CCM2-206ENST00000474617 LOC100289279A0A1B0GTE1 492 aa19.3■□□□□ 0.68
CCM2-206ENST00000474617 PMS2P1A4D2B8 440 aa19.3■□□□□ 0.68
CCM2-206ENST00000474617 A6NJ64 397 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms