RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 SLITRK2Q9H156 845 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 MMP27Q9H306 513 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 NELFAQ9H3P2 528 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 MOB1AQ9H8S9 216 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 SEC61A2Q9H9S3 476 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 CALHM2Q9HA72 323 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 HMG20AQ9NP66 347 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 GALNT8Q9NY28 637 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 COA3Q9Y2R0 106 aaPredicted RBP12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 FAM215AQ9Y5M1 114 aa12.12□□□□□ -0.47
LDLRAP1-204ENST00000474283 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 ASH1LQ9NR48 2969 aaKnown RBP12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 PNMA8CA0A1B0GUJ8 204 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 TVP23AA6NH52 213 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 FAM171A2A8MVW0 826 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 OGG1O15527 345 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 QDPRP09417 244 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 MSR1P21757 451 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 GNLYP22749 145 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 GDI2P50395 445 aaKnown RBP12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 RORCP51449 518 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 OR12D2P58182 307 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 LSM3P62310 102 aaKnown RBP12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 CDK5R1Q15078 307 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 TAF13Q15543 124 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 SSX1Q16384 188 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 PCK2Q16822 640 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 DMKNQ6E0U4 476 aaPredicted RBP12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 OR2A2Q6IF42 318 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 ARL9Q6T311 187 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 TPRA1Q86W33 373 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 C9orf106Q8NAJ2 232 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 GALNT11Q8NCW6 608 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 TMEM54Q969K7 222 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 MCHR2Q969V1 340 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 OR8B4Q96RC9 309 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 TM9SF2Q99805 663 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 ZNF649Q9BS31 505 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 EMC6Q9BV81 110 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 TMED9Q9BVK6 235 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 NAA50Q9GZZ1 169 aaKnown RBP12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 SP140LQ9H930 580 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 NOSIPQ9Y314 301 aaKnown RBP12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 FLVCR1Q9Y5Y0 555 aa12.11□□□□□ -0.47
LDLRAP1-204ENST00000474283 NCOA6Q14686 2063 aaPredicted RBP12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 ZNF878C9JN71 531 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 DCTN6O00399 190 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 DHHO43323 396 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 CD2P06729 351 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 H2BFMP0C1H6 154 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 ZNF182P17025 639 aaPredicted RBP12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 CA7P43166 264 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 CCR9P51686 369 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 NCS1P62166 190 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 GRB2P62993 217 aaKnown RBP12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 PMPCAQ10713 525 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 ECH1Q13011 328 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 SPCS2Q15005 226 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 EIF2S3LQ2VIR3 472 aaKnown RBP12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 ZNF404Q494X3 552 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 TP53I3Q53FA7 332 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 CARD17Q5XLA6 110 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 FDX2Q6P4F2 183 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 C20orf196Q8IYI0 205 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 GJC3Q8NFK1 279 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 DYNC2LI1Q8TCX1 351 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 ZFAND2BQ8WV99 257 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 PELI1Q96FA3 418 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 LINC00470Q9BZP3 86 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 WDR12Q9GZL7 423 aaKnown RBP12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 ISG20L2Q9H9L3 353 aaKnown RBP12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 TXNL4BQ9NX01 149 aaKnown RBP12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 PEX16Q9Y5Y5 336 aa12.1□□□□□ -0.47
LDLRAP1-204ENST00000474283 MBD3L4A6NDZ8 208 aaPredicted RBP12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 MBD3L3A6NE82 208 aaPredicted RBP12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 MBD3L5A6NJ08 208 aaPredicted RBP12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 ZNF716A6NP11 495 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 CCL21O00585 134 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 PDCD5O14737 125 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 CASKO14936 926 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 IL2RAP01589 272 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 GLI4P10075 376 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 HSD11B1P28845 292 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 CRYBB2P43320 205 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 MTNR1BP49286 362 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 PSMD7P51665 324 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 SLC3A1Q07837 685 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 SCRN3Q0VDG4 424 aa12.09□□□□□ -0.47
LDLRAP1-204ENST00000474283 AQP6Q13520 282 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms