RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ZNF704Q6ZNC4 412 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 H1FNTQ75WM6 255 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 BTN2A1Q7KYR7 527 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 DPY19L4Q7Z388 723 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 CPEB2Q7Z5Q1 589 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 TMPRSS12Q86WS5 348 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 TIGD4Q8IY51 512 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 PM20D2Q8IYS1 436 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 ZNF679Q8IYX0 411 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 DND1Q8IYX4 353 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 ZNF441Q8N8Z8 693 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 NLGN4YQ8NFZ3 816 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 OR13C5Q8NGS8 318 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 OR2AJ1Q8NGZ0 328 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 OR2G2Q8NGZ5 317 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 OR56B4Q8NH76 319 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 SYNPRQ8TBG9 265 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 RPS4Y2Q8TD47 263 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 GPR119Q8TDV5 335 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 SMAP2Q8WU79 429 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 SLC25A43Q8WUT9 341 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 TMEM106AQ96A25 262 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 MIB2Q96AX9 1013 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 FOXRED1Q96CU9 486 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 ST6GAL2Q96JF0 529 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 MRGPRX4Q96LA9 322 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 RBP7Q96R05 134 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 OR8B4Q96RC9 309 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 OR6C1Q96RD1 312 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 DDOQ99489 341 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 TIMP4Q99727 224 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 CRB3Q9BUF7 120 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 GTPBP2Q9BX10 602 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 DEFB126Q9BYW3 111 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 POTEKPQ9BYX7 375 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 SEMA4CQ9C0C4 833 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 SLC25A18Q9H1K4 315 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 OR51J1Q9H342 316 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 TP63Q9H3D4 680 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 PLEKHA1Q9HB21 404 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 RANGRFQ9HD47 186 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 EMC7Q9NPA0 242 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 SLC17A5Q9NRA2 495 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 NUDT15Q9NV35 164 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 PAQR5Q9NXK6 330 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 ALKBH4Q9NXW9 302 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 VSX1Q9NZR4 365 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 CTSFQ9UBX1 484 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 STEAP1Q9UHE8 339 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 MRM2Q9UI43 246 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 ZNF222Q9UK12 451 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 POU2F3Q9UKI9 436 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 B9D1Q9UPM9 204 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 B3GALT5Q9Y2C3 310 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 POLR1DQ9Y2S0 133 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 B3GALT1Q9Y5Z6 326 aa5.27□□□□□ -1.57
ATPAF1-204ENST00000474020 MYO9BQ13459 2157 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 SLC22A23A1A5C7 686 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 A8MV72 311 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 UPK3AO75631 287 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 RBBP9O75884 186 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 SCGNO76038 276 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 AKR7A3O95154 331 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 PLGP00747 810 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 CFIP05156 583 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 CD3GP09693 182 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 UBCP0CG48 685 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 GIMD1P0DJR0 217 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 FOSL2P15408 326 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 ACHEP22303 614 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 GIFP27352 417 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 RCVRNP35243 200 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 SOX2P48431 317 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 NKX2-5P52952 324 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 CLRN1P58418 232 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 ACTBP60709 375 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 RPS11P62280 158 aaKnown RBP eCLIP5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 ACTG1P63261 375 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 DGCR2P98153 550 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 ROM1Q03395 351 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 SSBP1Q04837 148 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 KRTAP1-1Q07627 177 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 ZP4Q12836 540 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 TRA2AQ13595 282 aaKnown RBP eCLIP5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 IL11RAQ14626 422 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 SLC17A1Q14916 467 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 TAF13Q15543 124 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 OR7A5Q15622 319 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 FAM189A2Q15884 450 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 EXT1Q16394 746 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 MEP1BQ16820 701 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 PLA1AQ53H76 456 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 RNASE12Q5GAN4 147 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 ELFN2Q5R3F8 820 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 BCL2L15Q5TBC7 163 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 TMEM244Q5VVB8 128 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 METTL11BQ5VVY1 283 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 TMEM200BQ69YZ2 307 aa5.26□□□□□ -1.57
ATPAF1-204ENST00000474020 C3orf33Q6P1S2 294 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms