RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SDC3O75056 442 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 AKAIN1P0CW23 69 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 GABRA1P14867 456 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 ABCD3P28288 659 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 PRSS3P35030 304 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 RPL35P42766 123 aaKnown RBP9.82□□□□□ -0.84
C9orf3-214ENST00000473778 ADAM8P78325 824 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 ROM1Q03395 351 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 FMODQ06828 376 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 RAB11BQ15907 218 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 SGCBQ16585 318 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 FAM209BQ5JX69 171 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 STEAP1BQ6NZ63 245 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 C17orf107Q6ZR85 190 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 GPR119Q8TDV5 335 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 LMX1AQ8TE12 382 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 DUSP19Q8WTR2 217 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 CYYR1Q96J86 154 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 MNTQ99583 582 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 MS4A7Q9GZW8 240 aaPredicted RBP9.82□□□□□ -0.84
C9orf3-214ENST00000473778 DUSP15Q9H1R2 295 aaPredicted RBP9.82□□□□□ -0.84
C9orf3-214ENST00000473778 POFUT1Q9H488 388 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 APMAPQ9HDC9 416 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 PDE7BQ9NP56 450 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 PRMT8Q9NR22 394 aaPredicted RBP9.82□□□□□ -0.84
C9orf3-214ENST00000473778 RYDENQ9NUL5 291 aaKnown RBP9.82□□□□□ -0.84
C9orf3-214ENST00000473778 FBXO4Q9UKT5 387 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 MED12Q93074 2177 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 CABIN1Q9Y6J0 2220 aa9.82□□□□□ -0.84
C9orf3-214ENST00000473778 TRAV14DV4A0A0A6YYC5 116 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 SLC22A23A1A5C7 686 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 DCDC2BA2VCK2 349 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 ALG1L2C9J202 215 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 F5H5P2 479 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 ITGB2P05107 769 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 IGFBP3P17936 291 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 IL12BP29460 328 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 HOXA1P49639 335 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 BLKP51451 505 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 AKR1D1P51857 326 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 ZNF169Q14929 603 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 RTN4RL2Q86UN3 420 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 CATSPERDQ86XM0 798 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 GABRG1Q8N1C3 465 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 C15orf40Q8WUR7 153 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 ZNF587Q96SQ5 575 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 COA3Q9Y2R0 106 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 RHBDD3Q9Y3P4 386 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 TMED7-TICAM2A0A0A6YYA0 188 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 TLCD2A6NGC4 264 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 HMSDA8MTL9 139 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 C2CD4DB7Z1M9 353 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 TMEM150CB9EJG8 249 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 YKT6O15498 198 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 CDC40O60508 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 ZNF354AO60765 605 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 DXOO77932 396 aaKnown RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 ZNF735P0CB33 412 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 FAUP35544 74 aaKnown RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 SORDQ00796 357 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 CFHR1Q03591 330 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 SPOCK1Q08629 439 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 EIF2B1Q14232 305 aaKnown RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 ZNF660Q6AZW8 331 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 TSSK4Q6SA08 328 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 LANCL3Q6ZV70 420 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 MAMDC2Q7Z304 686 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 KRT77Q7Z794 578 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 STPG2Q8N412 459 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 LILRB2Q8N423 598 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 OR4S1Q8NGB4 309 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 TNFAIP8L1Q8WVP5 186 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 SLC41A2Q96JW4 573 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 PELOQ9BRX2 385 aaKnown RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 EXO5Q9H790 373 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 TMEM138Q9NPI0 162 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 VSX1Q9NZR4 365 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-214ENST00000473778 TMED7Q9Y3B3 224 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 EMC9Q9Y3B6 208 aa9.81□□□□□ -0.84
C9orf3-214ENST00000473778 EXPH5Q8NEV8 1989 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 UBE2QL1A1L167 161 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 LILRA5A6NI73 299 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 F8W036 122 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 PLPP3O14495 311 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 RLN2P04090 185 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 NME1P15531 152 aaKnown RBP9.8□□□□□ -0.84
C9orf3-214ENST00000473778 RIPPLY1Q0D2K3 151 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 PLCXD2Q0VAA5 305 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 BIKQ13323 160 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 C4orf46Q504U0 113 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 C1orf140Q5VVS0 124 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 SLC18B1Q6NT16 456 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 CORO6Q6QEF8 472 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 SHISA6Q6ZSJ9 500 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 ZNF627Q7L945 461 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 LYPD6Q86Y78 171 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 LINC00346Q8IVM7 164 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 OR4D6Q8NGJ1 314 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 OR1S1Q8NH92 325 aa9.8□□□□□ -0.84
C9orf3-214ENST00000473778 MRGPRFQ96AM1 343 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms