RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 GLYATL3Q5SZD4 288 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 C10orf91Q5T1B1 145 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 KLHL24Q6TFL4 600 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 NPSR1Q6W5P4 371 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 RD3Q7Z3Z2 195 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 PEG10Q86TG7 708 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 KDM8Q8N371 416 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 PRSS35Q8N3Z0 413 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 SLC22A24Q8N4F4 322 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 ARRDC1Q8N5I2 433 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 JAGN1Q8N5M9 183 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 COMMD1Q8N668 190 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 TMEM52Q8NDY8 209 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 OR8K3Q8NH51 312 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 OR52N5Q8NH56 324 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 ZPLD1Q8TCW7 415 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 PIK3IP1Q96FE7 263 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CMKLR1Q99788 373 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 NUDT9Q9BW91 350 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 TXNIPQ9H3M7 391 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 MOB1AQ9H8S9 216 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 RAB18Q9NP72 206 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 SERGEFQ9UGK8 458 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 ZNF346Q9UL40 294 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 B9D1Q9UPM9 204 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CEP290O15078 2479 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 FRG2CA6NGY1 282 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 FAM171A2A8MVW0 826 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 PRSS44E7EML9 344 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 NUPL2O15504 423 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 CT45A8P0DMV1 189 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CT45A9P0DMV2 189 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 ACRP10323 421 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 PTHLHP12272 177 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 WASP42768 502 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 UBE2IP63279 158 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 PJVKQ0ZLH3 352 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 EIF2B1Q14232 305 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 STK11Q15831 433 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 C2orf68Q2NKX9 166 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CT45A2Q5DJT8 189 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 HLA-DQA1Q5Y7H0 255 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 OR5T3Q8NGG3 340 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 OR4D10Q8NGI6 311 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 C16orf52Q8NHV5 167 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 FAM174AQ8TBP5 190 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 ZNRF4Q8WWF5 429 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 AQP3Q92482 292 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 SLC25A28Q96A46 364 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 SPACA7Q96KW9 195 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 NECAB3Q96P71 396 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 GABRG3Q99928 467 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 ADAM19Q9H013 955 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 TREM1Q9NP99 234 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 TMEM100Q9NV29 134 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 LRIT1Q9P2V4 623 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CPED1A4D0V7 1026 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 NPIPB13A6NJU9 1138 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 FAM25EA8MYX2 175 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 TMEM150CB9EJG8 249 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 NPIPB4C9JG80 1138 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 SULT2B1O00204 365 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 LDLRAD4O15165 306 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 AHSA1O95433 338 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 CRHP06850 196 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 ADH6P28332 368 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 IL12BP29460 328 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 BDKRB2P30411 391 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 DAP3P51398 398 aaKnown RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 BLKP51451 505 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 POLR2HP52434 150 aaKnown RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 SEC13P55735 322 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 GUCA2BQ16661 112 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 FNDC7Q5VTL7 733 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 YOD1Q5VVQ6 348 aaPredicted RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 NSUN5P2Q63ZY6 315 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 TRAPPC6BQ86SZ2 158 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 MISPQ8IVT2 679 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 ARHGEF39Q8N4T4 335 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 C19orf47Q8N9M1 422 aaKnown RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 OR9A4Q8NGU2 314 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 ASB5Q8WWX0 329 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 TMEM234Q8WY98 164 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 DCUN1D4Q92564 292 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 DVL3Q92997 716 aaPredicted RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 TCTN2Q96GX1 697 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 GPR174Q9BXC1 333 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 FARSAQ9Y285 508 aaKnown RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 MRPS2Q9Y399 296 aaKnown RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 HTTP42858 3142 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 EYSQ5T1H1 3165 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 PRR32B1ATL7 298 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 H0YIG0 161 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 ADAM11O75078 769 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 UTS2O95399 124 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 BGLAPP02818 100 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 F13BP05160 661 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 ZNF735P0CB33 412 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 CD79AP11912 226 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms