RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MMP7P09237 267 aaPredicted RBP16.77■□□□□ 0.27
PSPC1-203ENST00000471658 CD79AP11912 226 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 IL32P24001 234 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 GRNP28799 593 aaKnown RBP16.77■□□□□ 0.27
PSPC1-203ENST00000471658 MAP2K4P45985 399 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 ASCL1P50553 236 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 C22orf34Q6ZV56 151 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 OR52N5Q8NH56 324 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 S100PBPQ96BU1 408 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 SLC17A5Q9NRA2 495 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 PCDHGB1Q9Y5G3 927 aa16.77■□□□□ 0.27
PSPC1-203ENST00000471658 AGFG2O95081 481 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 CCKARP32238 428 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 HIST1H3AP68431 136 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 PSG4Q00888 419 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 AQP6Q13520 282 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 DOC2BQ14184 412 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 CCDC92Q53HC0 331 aaPredicted RBP16.76■□□□□ 0.27
PSPC1-203ENST00000471658 HIST2H3PS2Q5TEC6 136 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 HIST2H3AQ71DI3 136 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 PRSS48Q7RTY5 328 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 C1orf162Q8NEQ5 155 aaPredicted RBP16.76■□□□□ 0.27
PSPC1-203ENST00000471658 AKR7LQ8NHP1 331 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 KCNN2Q9H2S1 579 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 RNF121Q9H920 327 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 B3GNT2Q9NY97 397 aa16.76■□□□□ 0.27
PSPC1-203ENST00000471658 UGT2B10P36537 528 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 RAB1AP62820 205 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 ACTC1P68032 377 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 ACTA1P68133 377 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 SNTB1Q13884 538 aaKnown RBP16.75■□□□□ 0.27
PSPC1-203ENST00000471658 IRF3Q14653 427 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 OR2G6Q5TZ20 316 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 OR7E24Q6IFN5 339 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF774Q6NX45 483 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF322Q6U7Q0 402 aaPredicted RBP16.75■□□□□ 0.27
PSPC1-203ENST00000471658 SPARTQ8N0X7 666 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF454Q8N9F8 522 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 TSPAN14Q8NG11 270 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 SLAMF6Q96DU3 332 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 BOD1Q96IK1 185 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 JAM3Q9BX67 310 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 C1QTNF6Q9BXI9 259 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 HDHD5Q9BXW7 423 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 OR2H1Q9GZK4 316 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 WNT5BQ9H1J7 359 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 C1orf198Q9H425 327 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 CCNB1IP1Q9NPC3 277 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 PNRC2Q9NPJ4 139 aaKnown RBP16.75■□□□□ 0.27
PSPC1-203ENST00000471658 CENPMQ9NSP4 180 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 SLCO1C1Q9NYB5 712 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 EXOSC1Q9Y3B2 195 aaKnown RBP16.75■□□□□ 0.27
PSPC1-203ENST00000471658 TIMM10BQ9Y5J6 103 aa16.75■□□□□ 0.27
PSPC1-203ENST00000471658 OR5H1A6NKK0 313 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 C16orf97H3BN30 126 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 UBE2NP61088 152 aaKnown RBP16.74■□□□□ 0.27
PSPC1-203ENST00000471658 GALEQ14376 348 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 SLC36A2Q495M3 483 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 TP53I3Q53FA7 332 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF773Q6PK81 442 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 LRRN1Q6UXK5 716 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 MDP1Q86V88 176 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 GJC3Q8NFK1 279 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 MNTQ99583 582 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 ALG8Q9BVK2 526 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 CDCA4Q9BXL8 241 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 ACTR6Q9GZN1 396 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 ISG20L2Q9H9L3 353 aaKnown RBP16.74■□□□□ 0.27
PSPC1-203ENST00000471658 KCNJ16Q9NPI9 418 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 TMEM14AQ9Y6G1 99 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 MAGEA13PA6NCF6 341 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 RNF224P0DH78 156 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 SMIM18P0DKX4 95 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 MYL12AP19105 171 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 OR12D2P58182 307 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 FBXL19-AS1Q494R0 122 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 PABPC1L2AQ5JQF8 200 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF684Q5T5D7 378 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 ALKBH2Q6NS38 261 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 XKRXQ6PP77 449 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 PLEKHG7Q6ZR37 379 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 SYT9Q86SS6 491 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 INPP5EQ9NRR6 644 aa16.74■□□□□ 0.27
PSPC1-203ENST00000471658 MRM2Q9UI43 246 aaKnown RBP16.74■□□□□ 0.27
PSPC1-203ENST00000471658 ARPC4-TTLL3A0A0A6YYG9 625 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 PTHP01270 115 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 ATP6V1B1P15313 513 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 PCBD1P61457 104 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 EMX1Q04741 257 aaPredicted RBP16.73■□□□□ 0.27
PSPC1-203ENST00000471658 TFF3Q07654 80 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 SRSF1Q07955 248 aaKnown RBP eCLIP16.73■□□□□ 0.27
PSPC1-203ENST00000471658 VASH1Q7L8A9 365 aaPredicted RBP16.73■□□□□ 0.27
PSPC1-203ENST00000471658 C17orf78Q8N4C9 275 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF808Q8N4W9 903 aaPredicted RBP16.73■□□□□ 0.27
PSPC1-203ENST00000471658 NANOGP1Q8N7R0 232 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 CPEB3Q8NE35 698 aaKnown RBP16.73■□□□□ 0.27
PSPC1-203ENST00000471658 STEAP2Q8NFT2 490 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 SNX33Q8WV41 574 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 RNF133Q8WVZ7 376 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 SLC7A6Q92536 515 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms