RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PAQR4Q8N4S7 273 aaPredicted RBP13.19□□□□□ -0.3
SDC3-203ENST00000471567 IQCF1Q8N6M8 205 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 PROKR2Q8NFJ6 384 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 GJC3Q8NFK1 279 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 OR10H5Q8NGA6 315 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 PERPQ96FX8 193 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 BCL2L14Q9BZR8 327 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 ASH2LQ9UBL3 628 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 EIF3KQ9UBQ5 218 aaKnown RBP13.19□□□□□ -0.3
SDC3-203ENST00000471567 ENOPH1Q9UHY7 261 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 POLR1DQ9Y2S0 133 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 CMAHPQ9Y471 501 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
SDC3-203ENST00000471567 LOC100509620A0A075B734 347 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 C5orf49A4QMS7 147 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 H7C417 338 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 DOK2O60496 412 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 ICMTO60725 284 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 GPANK1O95872 356 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 HLA-DQA2P01906 255 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 CCL2P13500 99 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 PAICSP22234 425 aaKnown RBP13.18□□□□□ -0.3
SDC3-203ENST00000471567 PYCR1P32322 319 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 CDKN1AP38936 164 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 EVX1P49640 407 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 UCP2P55851 309 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 ATP5J2P56134 94 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 SNRPD2P62316 118 aaKnown RBP13.18□□□□□ -0.3
SDC3-203ENST00000471567 MEP1BQ16820 701 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 VASH1Q7L8A9 365 aaPredicted RBP13.18□□□□□ -0.3
SDC3-203ENST00000471567 OR9Q1Q8NGQ5 310 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 PKP2Q99959 881 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 CDADC1Q9BWV3 514 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 CACNG6Q9BXT2 260 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 PLK3Q9H4B4 646 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 S100A14Q9HCY8 104 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 PLEK2Q9NYT0 353 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 OAZ3Q9UMX2 235 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 LHFPL6Q9Y693 200 aa13.18□□□□□ -0.3
SDC3-203ENST00000471567 RTTNQ86VV8 2226 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 SURF4O15260 269 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 GPRIN2O60269 458 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 ZNF823P16415 610 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 SPI1P17947 270 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 CCNOP22674 350 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 FMO3P31513 532 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 GGT2P36268 569 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 ADAM8P78325 824 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 RAB35Q15286 201 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 CCDC92Q53HC0 331 aaPredicted RBP13.17□□□□□ -0.3
SDC3-203ENST00000471567 ARL9Q6T311 187 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 ICA1LQ8NDH6 482 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 OR2AJ1Q8NGZ0 328 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 PTP4A1Q93096 173 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 MRPL24Q96A35 216 aaKnown RBP13.17□□□□□ -0.3
SDC3-203ENST00000471567 DOK1Q99704 481 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 BARX1Q9HBU1 254 aaPredicted RBP13.17□□□□□ -0.3
SDC3-203ENST00000471567 MRPL22Q9NWU5 206 aaKnown RBP13.17□□□□□ -0.3
SDC3-203ENST00000471567 CYB5R1Q9UHQ9 305 aa13.17□□□□□ -0.3
SDC3-203ENST00000471567 TMEM129A0AVI4 362 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 OR6C6A6NF89 314 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 SAC3D1A6NKF1 404 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 PRR23D1E9PI22 279 aaPredicted RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 RER1O15258 196 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 SYNGR3O43761 229 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 MITFO75030 526 aaPredicted RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 FAM157BP0CG42 384 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 PRR23D2P0DMB1 279 aaPredicted RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 HTR5AP47898 357 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 PPP2R2BQ00005 443 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 DBPQ10586 325 aaPredicted RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 PTGES3Q15185 160 aaKnown RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 ZSCAN26Q16670 478 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 Q5PR19 223 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 TMEM236Q5W0B7 351 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 OTPQ5XKR4 325 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 RGS7BPQ6MZT1 257 aaPredicted RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 SLC18B1Q6NT16 456 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 TGIF2LYQ8IUE0 185 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 KRTAP1-3Q8IUG1 177 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 OR1F12Q8NHA8 337 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 ZNRF4Q8WWF5 429 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 IPCEF1Q8WWN9 437 aaPredicted RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 PLEKHA8Q96JA3 519 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 C4orf45Q96LM5 186 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 DCLRE1CQ96SD1 692 aaKnown RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 RBM4BQ9BQ04 359 aaKnown RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 PRRG3Q9BZD7 231 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 HDHD2Q9H0R4 259 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 ELOVL3Q9HB03 270 aa13.16□□□□□ -0.3
SDC3-203ENST00000471567 TMEFF2Q9UIK5 374 aaPredicted RBP13.16□□□□□ -0.3
SDC3-203ENST00000471567 FAM183AA6NL82 134 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 GYPBP06028 91 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 LCKP06239 509 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 ZNF250P15622 560 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms