RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 IFT74Q96LB3 600 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 SENP8Q96LD8 212 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 RBBP8Q99708 897 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CHCHD7Q9BUK0 85 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 PPA2Q9H2U2 334 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 AZI2Q9H6S1 392 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 NIPAL2Q9H841 368 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CSNK1G1Q9HCP0 422 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 NLE1Q9NVX2 485 aaPredicted RBP0.54□□□□□ -2.32
COMMD3-209ENST00000471350 SMOXQ9NWM0 555 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 ZNF337Q9Y3M9 751 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 TSSC4Q9Y5U2 329 aaPredicted RBP0.54□□□□□ -2.32
COMMD3-209ENST00000471350 ADGRA3Q8IWK6 1321 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 D6RAR5 112 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 F6UB75 175 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 PRAMEF26H0Y7S4 382 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 PRPSAP2O60256 369 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 PLIN3O60664 434 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CLDN9O95484 217 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 IGHV3-11P01762 117 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CD3GP09693 182 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CBR1P16152 277 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 GAP43P17677 238 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CD1CP29017 333 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CA8P35219 290 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CEACAM3P40198 252 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 RGS4P49798 205 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 DUSP3P51452 185 aaPredicted RBP0.53□□□□□ -2.32
COMMD3-209ENST00000471350 P2RX1P51575 399 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CDKN2DP55273 166 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CBX1P83916 185 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 FAM53BQ14153 422 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 QPRTQ15274 297 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 USH1GQ495M9 461 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 TTC23Q5W5X9 447 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 APOBEC3HQ6NTF7 200 aaKnown RBP0.53□□□□□ -2.32
COMMD3-209ENST00000471350 ENPP6Q6UWR7 440 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 ZNF101Q8IZC7 436 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 ZNF713Q8N859 430 aaPredicted RBP0.53□□□□□ -2.32
COMMD3-209ENST00000471350 MFSD9Q8NBP5 474 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CXorf40AQ8TE69 158 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 N4BP2L2Q92802 583 aaPredicted RBP0.53□□□□□ -2.32
COMMD3-209ENST00000471350 EMG1Q92979 244 aaKnown RBP0.53□□□□□ -2.32
COMMD3-209ENST00000471350 DUS3LQ96G46 650 aaKnown RBP0.53□□□□□ -2.32
COMMD3-209ENST00000471350 SERPINB12Q96P63 405 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 CSPG4P5Q96PW8 444 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 SLC38A2Q96QD8 506 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 DUSP21Q9H596 190 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 KCNJ16Q9NPI9 418 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 TMEM106BQ9NUM4 274 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.53□□□□□ -2.32
COMMD3-209ENST00000471350 IL37Q9NZH6 218 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 SLC7A8Q9UHI5 535 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 MAPK8IP3Q9UPT6 1336 aa0.53□□□□□ -2.32
COMMD3-209ENST00000471350 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.33
COMMD3-209ENST00000471350 DOCK8Q8NF50 2099 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 MBLAC1A4D2B0 266 aaPredicted RBP0.52□□□□□ -2.33
COMMD3-209ENST00000471350 METTL21EPA6NDL7 271 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 GOLGA6L4A6NEF3 574 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 FAM47DPA6NHR8 397 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 PRRG1O14668 218 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 PALMO75781 387 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 SEMA3DO95025 777 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 SCELO95171 688 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 INAFM2P0DMQ5 153 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 OR5H8P0DN80 308 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 EPB41P11171 864 aaKnown RBP0.52□□□□□ -2.33
COMMD3-209ENST00000471350 MAPK3P27361 379 aaPredicted RBP0.52□□□□□ -2.33
COMMD3-209ENST00000471350 HLA-DMAP28067 261 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 ARFIP1P53367 373 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 TPBGQ13641 420 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 DMC1Q14565 340 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 SLC36A3Q495N2 470 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 ISLR2Q6UXK2 745 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 TMEM25Q86YD3 366 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 LY6G5BQ8NDX9 201 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 TRPV1Q8NER1 839 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 OR5T1Q8NG75 326 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 RHEBL1Q8TAI7 183 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 UBE2Q2Q8WVN8 375 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 RNF145Q96MT1 663 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 C18orf15Q96N68 181 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 RPRD1AQ96P16 312 aaPredicted RBP0.52□□□□□ -2.33
COMMD3-209ENST00000471350 COPS8Q99627 209 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 PARD6BQ9BYG5 372 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 GCOM2Q9BZD3 368 aaPredicted RBP0.52□□□□□ -2.33
COMMD3-209ENST00000471350 ABCG5Q9H222 651 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 EPS15L1Q9UBC2 864 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 SVILO95425 2214 aa0.52□□□□□ -2.33
COMMD3-209ENST00000471350 OR5H1A6NKK0 313 aa0.51□□□□□ -2.33
COMMD3-209ENST00000471350 DNALI1O14645 258 aaPredicted RBP0.51□□□□□ -2.33
COMMD3-209ENST00000471350 NVLO15381 856 aaKnown RBP0.51□□□□□ -2.33
COMMD3-209ENST00000471350 PLXNB1O43157 2135 aa0.51□□□□□ -2.33
COMMD3-209ENST00000471350 CACNA1GO43497 2377 aa0.51□□□□□ -2.33
COMMD3-209ENST00000471350 EIF4E2O60573 245 aaKnown RBP0.51□□□□□ -2.33
COMMD3-209ENST00000471350 ABCC9O60706 1549 aa0.51□□□□□ -2.33
COMMD3-209ENST00000471350 PABPC4LP0CB38 370 aaKnown RBP0.51□□□□□ -2.33
COMMD3-209ENST00000471350 DBTP11182 482 aaKnown RBP0.51□□□□□ -2.33
COMMD3-209ENST00000471350 VHLP40337 213 aa0.51□□□□□ -2.33
COMMD3-209ENST00000471350 UBE2E1P51965 193 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms