RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 APOC1P02654 83 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 SCG5P05408 212 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 CD79AP11912 226 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 BMP5P22003 454 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 EDNRAP25101 427 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 PSMA1P25786 263 aaKnown RBP8.58□□□□□ -1.04
CCM2-204ENST00000470837 ARR3P36575 388 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 CA7P43166 264 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 GRB2P62993 217 aaKnown RBP8.58□□□□□ -1.04
CCM2-204ENST00000470837 ROM1Q03395 351 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 ACSM1Q08AH1 577 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 FOXF2Q12947 444 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 ECH1Q13011 328 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 TSTQ16762 297 aaKnown RBP8.58□□□□□ -1.04
CCM2-204ENST00000470837 PCK2Q16822 640 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 CCDC58Q4VC31 144 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 MTFR2Q6P444 385 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 PCSK4Q6UW60 755 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 LRRN1Q6UXK5 716 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 SEM1Q6ZVN7 128 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 RHOUQ7L0Q8 258 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 LINGO2Q7L985 606 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 SSX6Q7RTT6 188 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 BTLAQ7Z6A9 289 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 SYT9Q86SS6 491 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 CLVS1Q8IUQ0 354 aaPredicted RBP8.58□□□□□ -1.04
CCM2-204ENST00000470837 OR13F1Q8NGS4 319 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 SPTSSAQ969W0 71 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 NABP1Q96AH0 204 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 STARD4Q96DR4 205 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
CCM2-204ENST00000470837 LRRC46Q96FV0 321 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 SH3GL3Q99963 347 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 HDHD2Q9H0R4 259 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 ISG20L2Q9H9L3 353 aaKnown RBP8.58□□□□□ -1.04
CCM2-204ENST00000470837 ELOVL3Q9HB03 270 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 ACOXLQ9NUZ1 547 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 SLCO1C1Q9NYB5 712 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 COQ3Q9NZJ6 369 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 MEMO1Q9Y316 297 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 LSM2Q9Y333 95 aaKnown RBP8.58□□□□□ -1.04
CCM2-204ENST00000470837 LHFPL6Q9Y693 200 aa8.58□□□□□ -1.04
CCM2-204ENST00000470837 FREM3P0C091 2139 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 DNAJC13O75165 2243 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 TRBV2A0A0J9YWF9 115 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 A0A1B0GUH1 482 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 PNMA8CA0A1B0GUJ8 204 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 IQCMA0A1B0GVH7 501 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 DPPA5A6NC42 116 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 MSTNO14793 375 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 RER1O15258 196 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 SGCEO43556 437 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 DOK2O60496 412 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 TOXO94900 526 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 HOXB1P14653 301 aaPredicted RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 CD36P16671 472 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 CELP19835 753 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 IL32P24001 234 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 RGS6P49758 472 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 GP2P55259 537 aaKnown RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 GPR50Q13585 617 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 ENDOGQ14249 297 aaKnown RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 RAB35Q15286 201 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 TRAM1Q15629 374 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 ELFN2Q5R3F8 820 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 GPR107Q5VW38 600 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 LIPNQ5VXI9 398 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 LIPKQ5VXJ0 399 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 RPL22L1Q6P5R6 122 aaKnown RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 ARL9Q6T311 187 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 ZNF627Q7L945 461 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 LUZP2Q86TE4 346 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 P2RY8Q86VZ1 359 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 RPRMLQ8N4K4 120 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 ZNF610Q8N9Z0 462 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 C1orf162Q8NEQ5 155 aaPredicted RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 OR1K1Q8NGR3 316 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 ST7LQ8TDW4 575 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 RNF133Q8WVZ7 376 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 HTRA1Q92743 480 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 OPALINQ96PE5 141 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 ATF6BQ99941 703 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 HDHD5Q9BXW7 423 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 COMMD4Q9H0A8 199 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 OPN3Q9H1Y3 402 aaPredicted RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 SP140LQ9H930 580 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 MOV10Q9HCE1 1003 aaKnown RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 MRM2Q9UI43 246 aaKnown RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 SLC5A6Q9Y289 635 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 KLHDC2Q9Y2U9 406 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 LRP12Q9Y561 859 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 LAMA5O15230 3695 aa8.57□□□□□ -1.04
CCM2-204ENST00000470837 TPRP12270 2363 aaKnown RBP8.57□□□□□ -1.04
CCM2-204ENST00000470837 DSPP15924 2871 aaKnown RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 PKD1L2Q7Z442 2459 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 TMEM269A0A1B0GVZ9 245 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 OR6C6A6NF89 314 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 LOC110117498-PIK3R3F6TDL0 507 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 MAGEB4O15481 346 aaPredicted RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 GPRIN2O60269 458 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms