RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SLC22A25Q6T423 547 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF704Q6ZNC4 412 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 SLC30A7Q8NEW0 376 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 RHOXF1Q8NHV9 184 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 FAM81AQ8TBF8 368 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 COG8Q96MW5 612 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 IL4I1Q96RQ9 567 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 C1QTNF6Q9BXI9 259 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 YIPF3Q9GZM5 350 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 EMC7Q9NPA0 242 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 MRPL22Q9NWU5 206 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 EIF3KQ9UBQ5 218 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 PCDHGB1Q9Y5G3 927 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 LHFPL6Q9Y693 200 aa10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 UTP20O75691 2785 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF503-AS2A6NEH8 195 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 OR6C6A6NF89 314 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 FAM171A2A8MVW0 826 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 DLGAP1O14490 977 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 SIAH2O43255 324 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 APOC1P02654 83 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 SCG5P05408 212 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 GYPBP06028 91 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 PATE4P0C8F1 98 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 RAD52P43351 418 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 SLC15A1P46059 708 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 RPS7P62081 194 aaKnown RBP10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 RPS23P62266 143 aaKnown RBP10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 TUBA1BP68363 451 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 TUBA4AP68366 448 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 GALK2Q01415 458 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 APOFQ13790 326 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 RAB39AQ14964 217 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 ELFN2Q5R3F8 820 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 SLC18B1Q6NT16 456 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF544Q6NX49 715 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 UGT2A3Q6UWM9 527 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 C20orf204Q6ZNR8 217 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 TUBA1AQ71U36 451 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 SLC16A9Q7RTY1 509 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 EGFL6Q8IUX8 553 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF511Q8NB15 262 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 NUP37Q8NFH4 326 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 OR51L1Q8NGJ5 315 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 OR1F12Q8NHA8 337 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 FGFBP3Q8TAT2 258 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 COQ7Q99807 217 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 HCAR1Q9BXC0 346 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 FAIMQ9NVQ4 179 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 CLN6Q9NWW5 311 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 PLEK2Q9NYT0 353 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 COMMD3-BMI1R4GMX3 469 aa10.96□□□□□ -0.65
SPTLC1-204ENST00000469778 HECTD1Q9ULT8 2610 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 PHYHO14832 338 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 CLUP10909 449 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 BMP4P12644 408 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 NR4A1P22736 598 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 CAPGP40121 348 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 RGS6P49758 472 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 CDH11P55287 796 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 CSNK2BP67870 215 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ADARB1P78563 741 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF787Q6DD87 383 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 DEGS2Q6QHC5 323 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 TMEM200AQ86VY9 491 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 CDC20BQ86Y33 519 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF584Q8IVC4 421 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 TIGD4Q8IY51 512 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 PIAS4Q8N2W9 510 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF611Q8N823 705 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 CPEB3Q8NE35 698 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ASB17Q8WXJ9 295 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 TFAP2CQ92754 450 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 SPTSSAQ969W0 71 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 POM121L2Q96KW2 1035 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ADI1Q9BV57 179 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 BCL2L14Q9BZR8 327 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 WNT5BQ9H1J7 359 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF442Q9H7R0 627 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 PLEKHF2Q9H8W4 249 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 SP140LQ9H930 580 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 MED20Q9H944 212 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 WDR76Q9H967 626 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ELOVL3Q9HB03 270 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 CDH20Q9HBT6 801 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 DDX28Q9NUL7 540 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 TBCCD1Q9NVR7 557 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 GDF2Q9UK05 429 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 POU2F3Q9UKI9 436 aa10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 ASH1LQ9NR48 2969 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-204ENST00000469778 IGHV2OR16-5A0A0B4J2B6 119 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 TVP23AA6NH52 213 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 SHISA9B4DS77 424 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 H3BSA7 217 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 HS3ST1O14792 307 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 SYNGR3O43761 229 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 DOK2O60496 412 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF254O75437 659 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 SPARCP09486 303 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms