RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TEAD3Q99594 435 aa9.03□□□□□ -0.96
NUP50-214ENST00000469163 GABRG3Q99928 467 aa9.03□□□□□ -0.96
NUP50-214ENST00000469163 RCC2Q9P258 522 aaKnown RBP9.03□□□□□ -0.96
NUP50-214ENST00000469163 ICKQ9UPZ9 632 aa9.03□□□□□ -0.96
NUP50-214ENST00000469163 EXOGQ9Y2C4 368 aaKnown RBP9.03□□□□□ -0.96
NUP50-214ENST00000469163 MMP24Q9Y5R2 645 aa9.03□□□□□ -0.96
NUP50-214ENST00000469163 PCNX1Q96RV3 2341 aa9.03□□□□□ -0.96
NUP50-214ENST00000469163 A0A1W2PPE2 198 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 C7orf77A4D0Y5 90 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 PAPLNO95428 1278 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 S1PR1P21453 382 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 BCL6P41182 706 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 ATP6V1FQ16864 119 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 AWAT1Q58HT5 328 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 SLCO4C1Q6ZQN7 724 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 SPATA19Q7Z5L4 167 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 OR9Q2Q8NGE9 314 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 EFCAB11Q9BUY7 163 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 CSTL1Q9H114 145 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 SLITRK2Q9H156 845 aa9.02□□□□□ -0.96
NUP50-214ENST00000469163 CNOT2Q9NZN8 540 aaKnown RBP9.02□□□□□ -0.96
NUP50-214ENST00000469163 IGHV3-20A0A0C4DH32 117 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 MASP2O00187 686 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 PGRMC2O15173 223 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 SLC16A5O15375 505 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 HCRTR1O43613 425 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 ENTPD6O75354 484 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 OPN1MWP04001 364 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 IFNA6P05013 189 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
NUP50-214ENST00000469163 OPN1MW2P0DN77 364 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 OPN1MW3P0DN78 364 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 IRF2P14316 349 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 SELEP16581 610 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 TBPP20226 339 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 ART1P52961 327 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 DLX5P56178 289 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 UBE2G2P60604 165 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 CHRFAM7AQ494W8 412 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 PRAMEF8Q5VWM4 474 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 PRAMEF7Q5VXH5 474 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 ADAMTSL4Q6UY14 1074 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 SLC5A8Q8N695 610 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 SLC35A5Q9BS91 424 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 ALKBH7Q9BT30 221 aaPredicted RBP9.02□□□□□ -0.97
NUP50-214ENST00000469163 OR8D2Q9GZM6 311 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 SEC61A2Q9H9S3 476 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 SUSD2Q9UGT4 822 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 DNAJC13O75165 2243 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 SCDO00767 359 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 CD80P33681 288 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 RASGEF1BQ0VAM2 473 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 HERPUD1Q15011 391 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 TMEM244Q5VVB8 128 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 FAM199XQ6PEV8 388 aaPredicted RBP9.02□□□□□ -0.97
NUP50-214ENST00000469163 GID4Q8IVV7 300 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 OR10G2Q8NGC3 310 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 PRRX2Q99811 253 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 NUDT22Q9BRQ3 303 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 RGCCQ9H4X1 137 aa9.02□□□□□ -0.97
NUP50-214ENST00000469163 LOC100509620A0A075B734 347 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 CCDC187A0A096LP49 1063 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 TMEM150CB9EJG8 249 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 MPC1LP0DKB6 136 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 PSMB1P20618 241 aaKnown RBP9.01□□□□□ -0.97
NUP50-214ENST00000469163 RAG2P55895 527 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 SLC37A1P57057 533 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
NUP50-214ENST00000469163 FABP5Q01469 135 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 NHLH1Q02575 133 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 PRDX1Q06830 199 aaKnown RBP9.01□□□□□ -0.97
NUP50-214ENST00000469163 SLC36A2Q495M3 483 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 C10orf91Q5T1B1 145 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 OR2G6Q5TZ20 316 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 SLC22A10Q63ZE4 541 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 BTNL3Q6UXE8 466 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 PRR22Q8IZ63 422 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 SPICQ8N5J4 248 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 CSNK1A1LQ8N752 337 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 OR5R1Q8NH85 324 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 NKX3-1Q99801 234 aaPredicted RBP9.01□□□□□ -0.97
NUP50-214ENST00000469163 SULT4A1Q9BR01 284 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 TEX101Q9BY14 249 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 WDR13Q9H1Z4 485 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 UBQLN3Q9H347 655 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 NPDC1Q9NQX5 325 aaPredicted RBP9.01□□□□□ -0.97
NUP50-214ENST00000469163 PPT2Q9UMR5 302 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 ANGPT4Q9Y264 503 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 MRPS2Q9Y399 296 aaKnown RBP9.01□□□□□ -0.97
NUP50-214ENST00000469163 ATRXP46100 2492 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 AKAP6Q13023 2319 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 SPTY2D1-AS1A0A0U1RR47 76 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 OR2M5A3KFT3 312 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 CD8B2A6NJW9 211 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 M0QZ24 198 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 PRICKLE3O43900 615 aaPredicted RBP9.01□□□□□ -0.97
NUP50-214ENST00000469163 GGCTO75223 188 aaKnown RBP9.01□□□□□ -0.97
NUP50-214ENST00000469163 NR2F6P10588 404 aa9.01□□□□□ -0.97
NUP50-214ENST00000469163 CD8BP10966 210 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms