RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 CGGBP1Q9UFW8 167 aaPredicted RBP12.53□□□□□ -0.4
SDCCAG3-209ENST00000468963 NDRG4Q9ULP0 352 aaKnown RBP12.53□□□□□ -0.4
SDCCAG3-209ENST00000468963 ENPP4Q9Y6X5 453 aa12.53□□□□□ -0.4
SDCCAG3-209ENST00000468963 LOC105371242A0A075B767 164 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 PRSS37A4D1T9 235 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 GSTA4O15217 222 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 CCDC22O60826 627 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 TUBG1P23258 451 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 RPL4P36578 427 aaKnown RBP12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 SLC3A1Q07837 685 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 MESTQ5EB52 335 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 MTX3Q5HYI7 312 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 ARL9Q6T311 187 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 THSD4Q6ZMP0 1018 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 USP43Q70EL4 1123 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 TEX29Q8N6K0 151 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 TUBG2Q9NRH3 451 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 STARD10Q9Y365 291 aa12.52□□□□□ -0.41
SDCCAG3-209ENST00000468963 DYSFO75923 2080 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 A0A0G2JMP0 313 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 A0A0X1KG70 313 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 A0A1W2PRQ8 180 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 J3QLI3 93 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 HAX1O00165 279 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 CTLA4P16410 223 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 KITLGP21583 273 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 LIMS1P48059 325 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 SCRN3Q0VDG4 424 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 HNRNPA0Q13151 305 aaKnown RBP12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 SCGB2A2Q13296 93 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 DGCR6Q14129 220 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 Q6ZR03 302 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 VASH1Q7L8A9 365 aaPredicted RBP12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 RRM2BQ7LG56 351 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 OR4M2Q8NGB6 313 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 ZNF418Q8TF45 676 aaPredicted RBP12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 CMBLQ96DG6 245 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 C7orf34Q96L11 122 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 NRIP3Q9NQ35 241 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 DCAF16Q9NXF7 216 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 NDUFAF4Q9P032 175 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 OPN4Q9UHM6 478 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 PURGQ9UJV8 347 aaKnown RBP12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 PCDHB10Q9UN67 800 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 SIGLEC7Q9Y286 467 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 TMEM5Q9Y2B1 443 aa12.51□□□□□ -0.41
SDCCAG3-209ENST00000468963 TEX13CA0A0J9YWL9 993 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 NDUFAB1O14561 156 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 XKRYO14609 159 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 IMPA2O14732 288 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 SGCEO43556 437 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 ABHD16AO95870 558 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 H1F0P07305 194 aaKnown RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 NCK1P16333 377 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 EPHA1P21709 976 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 GATA3P23771 443 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 ZFP36P26651 326 aaKnown RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 RBMXP38159 391 aaKnown RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 MDH1P40925 334 aaKnown RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 OMPP47874 163 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 FXYD6P3P58550 94 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 HILS1P60008 231 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 LSM6P62312 80 aaKnown RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 TNFAIP6P98066 277 aaPredicted RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 CCDC92Q53HC0 331 aaPredicted RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 GPR139Q6DWJ6 353 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 ZER1Q7Z7L7 766 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 CYP4Z1Q86W10 505 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 NPEPL1Q8NDH3 523 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 SLC7A6Q92536 515 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 PTP4A1Q93096 173 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 HAVCR1Q96D42 359 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 FAM46AQ96IP4 442 aaKnown RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 SAMD8Q96LT4 415 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 ZNF570Q96NI8 536 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 GPX7Q96SL4 187 aaPredicted RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 GAL3ST1Q99999 423 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 VSX1Q9NZR4 365 aaPredicted RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 COA3Q9Y2R0 106 aaPredicted RBP12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 NPTNQ9Y639 398 aa12.5□□□□□ -0.41
SDCCAG3-209ENST00000468963 TANC2Q9HCD6 1990 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 OR6C6A6NF89 314 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 TIMM8AO60220 97 aaPredicted RBP12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 DOK2O60496 412 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 SLC16A7O60669 478 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 KHDRBS3O75525 346 aaKnown RBP12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 RGS9O75916 674 aaPredicted RBP12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 NDUFB2O95178 105 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 TXNDC12O95881 172 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 FSHBP01225 129 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 IGHV2-70P01814 119 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 RHCEP18577 417 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 ADRA2CP18825 462 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 SDHAP31040 664 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 CDKN2AP42771 156 aaKnown RBP12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 HTR5AP47898 357 aa12.49□□□□□ -0.41
SDCCAG3-209ENST00000468963 PSME3P61289 254 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms