RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ITLN2Q8WWU7 325 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ASB17Q8WXJ9 295 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 HTRA1Q92743 480 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 S100PBPQ96BU1 408 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF837Q96EG3 531 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-216ENST00000468949 DDOQ99489 341 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 TBX5Q99593 518 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 SH3GL3Q99963 347 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 COPS4Q9BT78 406 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 WACQ9BTA9 647 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF416Q9BWM5 594 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 YIPF3Q9GZM5 350 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 C1orf198Q9H425 327 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 VCX3AQ9NNX9 186 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 NGBQ9NPG2 151 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 HAO2Q9NYQ3 351 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 PLEK2Q9NYT0 353 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 CNOT2Q9NZN8 540 aaKnown RBP7.12□□□□□ -1.27
HDAC6-216ENST00000468949 NDRG3Q9UGV2 375 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 IKZF2Q9UKS7 526 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 MYRFQ9Y2G1 1151 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 UGT2A1Q9Y4X1 527 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 LRRC42Q9Y546 428 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 DOCK7Q96N67 2140 aa7.12□□□□□ -1.27
HDAC6-216ENST00000468949 PHF3Q92576 2039 aaKnown RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 OR5H1A6NKK0 313 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF878C9JN71 531 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 SGCEO43556 437 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 RGS10O43665 173 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 MPZL1O95297 269 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 HLA-HP01893 362 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TFP02787 698 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 KRT8P05787 483 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 SBK2P0C263 348 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 OR2T7P0C7T2 308 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 PIPP12273 146 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 DCKP27707 260 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 APLNRP35414 380 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 SLC15A1P46059 708 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 HTR5AP47898 357 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 FOXG1P55316 489 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 GABARAPL2P60520 117 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TUBA1BP68363 451 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TUBA4AP68366 448 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 SORDQ00796 357 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 PIGFQ07326 219 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 FAM27E3Q08E93 113 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 DBPQ10586 325 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 GABRA6Q16445 453 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 KCNMB1Q16558 191 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 FBXL19-AS1Q494R0 122 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TIMM23BQ5SRD1 257 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 C1QTNF12Q5T7M4 302 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 LINC01590Q5TEZ4 76 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 FAM27BQ5VT28 67 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 OTPQ5XKR4 325 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF544Q6NX49 715 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 KCTD18Q6PI47 426 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 FOXL2NBQ6ZUU3 175 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TUBA1AQ71U36 451 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF627Q7L945 461 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 DPY19L4Q7Z388 723 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 DCXRQ7Z4W1 244 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 KRT77Q7Z794 578 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 SYT9Q86SS6 491 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TIGD4Q8IY51 512 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ACBD7Q8N6N7 88 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 OR4F15Q8NGB8 312 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 OR2T27Q8NH04 317 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 OTOSQ8NHW6 89 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 FBLIM1Q8WUP2 373 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 HSD17B8Q92506 261 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 BCL2L2Q92843 193 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 NABP1Q96AH0 204 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 LGALS12Q96DT0 336 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ZC3HAV1LQ96H79 300 aaKnown RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TMEM80Q96HE8 168 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 YTHDF1Q9BYJ9 559 aaKnown RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TTTY10Q9BZA0 68 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 HDHD2Q9H0R4 259 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 OR10A4Q9H209 315 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ADGRL4Q9HBW9 690 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 SLC17A5Q9NRA2 495 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 INPP5EQ9NRR6 644 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 CENPMQ9NSP4 180 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 PLCXD1Q9NUJ7 323 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 MRPL22Q9NWU5 206 aaKnown RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 JKAMPQ9P055 326 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 GDF2Q9UK05 429 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ERGIC3Q9Y282 383 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 EXOSC1Q9Y3B2 195 aaKnown RBP7.11□□□□□ -1.27
HDAC6-216ENST00000468949 TIMM10BQ9Y5J6 103 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ICE1Q9Y2F5 2266 aa7.11□□□□□ -1.27
HDAC6-216ENST00000468949 ARPC4-TTLL3A0A0A6YYG9 625 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 A0A1W2PR80 420 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 TUBAL3A6NHL2 446 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 CYSRT1A8MQ03 144 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 J3QL48 77 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 CASKO14936 926 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 H2BFMP0C1H6 154 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms