RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GDF2Q9UK05 429 aaPredicted RBP13.25□□□□□ -0.29
SNIP1-202ENST00000468040 TMEM14AQ9Y6G1 99 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 IQCMA0A1B0GVH7 501 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 SGCEO43556 437 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 DENRO43583 198 aaKnown RBP13.24□□□□□ -0.29
SNIP1-202ENST00000468040 DOK2O60496 412 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 SERPINA5P05154 406 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 MRPL3P09001 348 aaKnown RBP13.24□□□□□ -0.29
SNIP1-202ENST00000468040 SBK2P0C263 348 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 DBTP11182 482 aaKnown RBP13.24□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF83P51522 516 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 IDH3GP51553 393 aaPredicted RBP13.24□□□□□ -0.29
SNIP1-202ENST00000468040 NUDT6P53370 316 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 CSNK2BP67870 215 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 HIST1H3AP68431 136 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 RAB35Q15286 201 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 PABPC1L2AQ5JQF8 200 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 HIST2H3PS2Q5TEC6 136 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 KRT80Q6KB66 452 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 CORO6Q6QEF8 472 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 TMEM108Q6UXF1 575 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 DPY19L4Q7Z388 723 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 LINC00346Q8IVM7 164 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 OTOSQ8NHW6 89 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 RNFT2Q96EX2 444 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 CNBD2Q96M20 576 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF75AQ96N20 296 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 C1QTNF6Q9BXI9 259 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 HDHD2Q9H0R4 259 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 ESRP2Q9H6T0 727 aaKnown RBP13.24□□□□□ -0.29
SNIP1-202ENST00000468040 PLEK2Q9NYT0 353 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 PCDHGB1Q9Y5G3 927 aa13.24□□□□□ -0.29
SNIP1-202ENST00000468040 HELZ2Q9BYK8 2649 aaKnown RBP13.23□□□□□ -0.29
SNIP1-202ENST00000468040 IRGMA1A4Y4 181 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 M0R1B8 84 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 RER1O15258 196 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 GOSR1O95249 250 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 OR2T7P0C7T2 308 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 COX5BP10606 129 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 COX6B1P14854 86 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF14P17017 642 aaPredicted RBP13.23□□□□□ -0.29
SNIP1-202ENST00000468040 PTAFRP25105 342 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 RPS27P42677 84 aaKnown RBP13.23□□□□□ -0.29
SNIP1-202ENST00000468040 NR1H2P55055 460 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 RAB40BQ12829 278 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 EIF2B1Q14232 305 aaKnown RBP13.23□□□□□ -0.29
SNIP1-202ENST00000468040 RAB39AQ14964 217 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 SMN1Q16637 294 aaKnown RBP13.23□□□□□ -0.29
SNIP1-202ENST00000468040 BEX5Q5H9J7 111 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 ELFN2Q5R3F8 820 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 SP5Q6BEB4 398 aaPredicted RBP13.23□□□□□ -0.29
SNIP1-202ENST00000468040 CFAP77Q6ZQR2 320 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 VASH1Q7L8A9 365 aaPredicted RBP13.23□□□□□ -0.29
SNIP1-202ENST00000468040 DCXRQ7Z4W1 244 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 IL17RDQ8NFM7 739 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 OR2T27Q8NH04 317 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 AKR7LQ8NHP1 331 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 WNT5BQ9H1J7 359 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 MRPS18AQ9NVS2 196 aaKnown RBP13.23□□□□□ -0.29
SNIP1-202ENST00000468040 NPAP1Q9NZP6 1156 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 ATPIF1Q9UII2 106 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 LAMP5Q9UJQ1 280 aa13.23□□□□□ -0.29
SNIP1-202ENST00000468040 IGHV1-18A0A0C4DH31 117 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 PHYHO14832 338 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 FADS2O95864 444 aaKnown RBP13.22□□□□□ -0.29
SNIP1-202ENST00000468040 LYNP07948 512 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 CECR9P0C854 216 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 PSKH1P11801 424 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ALOX5APP20292 161 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 STOMP27105 288 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 HTR5AP47898 357 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 CXCR4P61073 352 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ACTC1P68032 377 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ACTA1P68133 377 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ECH1Q13011 328 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 DAZAP2Q15038 168 aaPredicted RBP13.22□□□□□ -0.29
SNIP1-202ENST00000468040 TBC1D28Q2M2D7 210 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 KLHL22Q53GT1 634 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 CCDC92Q53HC0 331 aaPredicted RBP13.22□□□□□ -0.29
SNIP1-202ENST00000468040 C6orf141Q5SZD1 244 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF774Q6NX45 483 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 RHOUQ7L0Q8 258 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 CDC20BQ86Y33 519 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF584Q8IVC4 421 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 SLC35F2Q8IXU6 374 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 CPEB3Q8NE35 698 aaKnown RBP13.22□□□□□ -0.29
SNIP1-202ENST00000468040 SLC30A7Q8NEW0 376 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 OR1J2Q8NGS2 313 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ST7LQ8TDW4 575 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ASB17Q8WXJ9 295 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 MAP6Q96JE9 813 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ATF6BQ99941 703 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 KCNS3Q9BQ31 491 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 ABHD6Q9BV23 337 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 AMBNQ9NP70 447 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 PLCXD1Q9NUJ7 323 aa13.22□□□□□ -0.29
SNIP1-202ENST00000468040 PLEKHB1Q9UF11 243 aaPredicted RBP13.22□□□□□ -0.29
SNIP1-202ENST00000468040 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.21□□□□□ -0.29
SNIP1-202ENST00000468040 OR6C6A6NF89 314 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms